Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178255.1_202017-04-
21] 1,675 sequences; 11,916,863 total letters
Query= NC_004778.3
Length=129593
Score E
Sequences producing significant alignments: (Bits) Value
seq1277 113 4e-20
seq712 82.4 6e-11
>seq1277
Length=47777
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 18815 CCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCC 18874
|| |||| | ||||| ||| | || || || |||||||| ||||| |||||||| | |
Sbjct 31646 CCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGAC 31587
Query 18875 ATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGC 18934
| ||| | |||| || ||||| ||||| ||| | || | ||| |||||||| ||
Sbjct 31586 AGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGCTGATCTGGAGGG 31527
Query 18935 ACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTT 18994
| || || ||||| ||||||| || || | | ||| |||||| || || |
Sbjct 31526 ATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACT 31467
Query 18995 TCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAAAATTTGCAT 19041
|| | || ||||||||||| || ||||| ||||| ||||| |||||
Sbjct 31466 TCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 31420
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 18815 CCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCC 18874
|| |||| ||| || ||||||| ||| | ||||| |||||||| || ||||| || | |
Sbjct 32330 CCACCTCTCAATCTCAACACCAGGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAC 32271
Query 18875 ATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGC 18934
| ||| | | || || || || ||||| ||| |||| | |||||| |||||| ||
Sbjct 32270 AAGGTTCTACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGG 32211
Query 18935 ACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTT 18994
| || ||||| || |||||| ||| || | | | | ||| ||| || ||
Sbjct 32210 ATACCTTCTTTATCTTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACC 32151
Query 18995 TCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAAAATTTGCAT 19041
|| | ||| || || || ||||||| ||||||||| |||||||||||
Sbjct 32150 TCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 32104
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 18815 CCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCC 18874
|| |||| ||| || ||||||| |||||||||||||| || ||||| || ||||| | |
Sbjct 32102 CCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGAC 32043
Query 18875 ATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGC 18934
| ||| | | || ||||| || ||||| ||| | || | ||| || ||||| ||
Sbjct 32042 AGCGTTCTACCATCTTCCAGTTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGA 31983
Query 18935 ACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTT 18994
| || || ||||| ||||||| || || | | | | ||| || || ||
Sbjct 31982 ATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACC 31923
Query 18995 TCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAAAATTTGCAT 19041
|| | ||| || || |||||||| | || |||||||||||||||||
Sbjct 31922 TCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 31876
Score = 95.1 bits (104), Expect = 1e-14
Identities = 159/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 18812 TTTCCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCC 18871
|| || || | |||||| || || | ||| | || |||||||||||||||||||| |||
Sbjct 32561 TTACCACCCCTCAACCTCAAGACGAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCC 32502
Query 18872 GCCATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACG 18931
| || ||| | | || || || |||||||| ||| |||| | ||| ||||| ||
Sbjct 32501 GACAGCGTTCTACCATCTTCTAGTTGTTTACCGGCAAAAATCAATCTTTGCTGGTCTGGA 32442
Query 18932 GGCACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCC 18991
|| | || || ||||| |||||| || || | | | | ||| || || ||
Sbjct 32441 GGAATACCTTCCTTGTCTTGAATTTTTGACTTAACGTTGTCAATAGTGTCAGAAGATTCA 32382
Query 18992 GTTTCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAAAATTTGCAT 19041
|| | ||| || || |||||||| | || ||||| |||||||||||
Sbjct 32381 ACCTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACGAAAATTTGCAT 32332
>seq712
Length=155938
Score = 82.4 bits (90), Expect = 6e-11
Identities = 156/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 18815 CCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCC 18874
|| |||| ||| || || |||| ||| | ||||| |||||||| || ||||| || | |
Sbjct 8795 CCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 8736
Query 18875 ATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGC 18934
| ||| | | || |||| || ||||| ||| | || | ||| || || || ||
Sbjct 8735 AAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGA 8676
Query 18935 ACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTT 18994
| || || ||||| || || || || | | | | ||| || || || |
Sbjct 8675 ATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 8616
Query 18995 TCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAAAATTTGCATTTT 19044
|| | |||||| || ||||| |||||||| ||||| ||||||||||| ||
Sbjct 8615 TCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 8566
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 414564336884950
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |