Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178255.1_202017-04-
21] 1,675 sequences; 11,916,863 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq1277 118 2e-21
seq3 105 2e-17
seq306 95.1 3e-14
seq712 86.0 1e-11
>seq1277
Length=47777
Score = 118 bits (130), Expect = 2e-21
Identities = 154/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473
||||| || | ||| ||||| || |||||||||| ||||||||||| ||| || || ||
Sbjct 31863 TCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACC 31804
Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533
||||| |||||||| ||||| ||||| | | ||| || || ||| || |||||
Sbjct 31803 GTCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGGGATACCTTCCTT 31744
Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593
||||| || || ||| ||| |||| ||||| | | ||| || || || |||||
Sbjct 31743 GTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACCTCTAAAGTGAT 31684
Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| ||||| || | ||| || ||||| || ||
Sbjct 31683 GGTTTTACCGGTCAAAGTCTTAACAAAGATCTG 31651
Score = 118 bits (130), Expect = 2e-21
Identities = 154/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473
||||| || ||||| ||||| || |||||||||| ||||||||||| ||| || || ||
Sbjct 32319 TCTCAACACCAGGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACC 32260
Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533
|||||| || ||||| || || || || | | ||| || |||||| || ||||||
Sbjct 32259 ATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGGATACCTTCTTT 32200
Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593
|| ||||| || || ||| || | ||||| | | ||| || || | || ||
Sbjct 32199 ATCTTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTAT 32140
Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||| || || |||||||| || ||||||||
Sbjct 32139 AGTCTTCCCTGTTAGAGTTTTGACGAAAATTTG 32107
Score = 113 bits (124), Expect = 1e-19
Identities = 152/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 199415 CTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCA 199474
|||| ||| ||||| ||||| ||||||||||| | |||||||| | || || || |||
Sbjct 32546 CTCAAGACGAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCA 32487
Query 199475 TCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGC 199534
||||| || || || ||||| || || | | |||||||| ||| ||| |||||
Sbjct 32486 TCTTCTAGTTGTTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTG 32427
Query 199535 TCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATC 199594
|| ||||| ||| ||| ||| || | ||||| | | ||| || || | || ||
Sbjct 32426 TCTTGAATTTTTGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATA 32367
Query 199595 GTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|||||||| || || || || || ||||||||
Sbjct 32366 GTCTTACCTGTCAGTGTCTTGACGAAAATTTG 32335
Score = 89.7 bits (98), Expect = 1e-12
Identities = 136/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 199433 GTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCG 199492
|| ||||| || || | ||| || |||| || || || ||||||||||| ||||| |||
Sbjct 32072 GTAGACTCTTTCTGAATGTTATAATCAGACAGCGTTCTACCATCTTCCAGTTGCTTACCG 32013
Query 199493 GCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTC 199552
|| ||||| | | || || || ||| ||| ||||| || ||||| || |||
Sbjct 32012 GCAAAGATCAATCTTTGTTGATCTGGAGGAATACCTTCCTTGTCTTGAATTTTCGACTTA 31953
Query 199553 ACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTT 199612
||| || | ||||| | | ||| || || | || || |||||||| || || ||
Sbjct 31952 ACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATAGTCTTACCTGTCAGTGTC 31893
Query 199613 TTCACAAAAATTTG 199626
|| |||||||||||
Sbjct 31892 TTGACAAAAATTTG 31879
>seq3
Length=255791
Score = 105 bits (116), Expect = 2e-17
Identities = 148/208 (71%), Gaps = 0/208 (0%)
Strand=Plus/Minus
Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473
||||| ||| | ||| | ||| || || ||||| | ||||||||||| ||| || || ||
Sbjct 2874 TCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGACAAGGTTCTACC 2815
Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533
||||||| ||||| || || ||||| | | || ||||| || || |||||
Sbjct 2814 GTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTT 2755
Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593
|| ||||||||| ||| || || | ||||| | | ||| || ||||| |||||
Sbjct 2754 GTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGAT 2695
Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAA 199621
|||||||| || | ||| || ||||||
Sbjct 2694 GGTCTTACCAGTCAAAGTCTTGACAAAA 2667
>seq306
Length=23280
Score = 95.1 bits (104), Expect = 3e-14
Identities = 145/207 (70%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473
||||| ||| | || | ||| || |||||||||| ||||||||||| | ||| || ||
Sbjct 12458 TCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAGAGTTCTACC 12399
Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533
||||||| ||||| || || ||||| | | || ||||| || || |||||
Sbjct 12398 GTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTT 12339
Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593
|| || ||||| ||| || || | |||||| | | ||| || ||||| |||||
Sbjct 12338 GTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCCAAAGTGAT 12279
Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAA 199620
|||||||| || | ||| || || ||
Sbjct 12278 GGTCTTACCAGTCAAAGTCTTAACGAA 12252
>seq712
Length=155938
Score = 86.0 bits (94), Expect = 1e-11
Identities = 76/95 (80%), Gaps = 0/95 (0%)
Strand=Plus/Plus
Query 200930 AAAAACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACG 200989
||| | | ||||| || || ||||| ||||||||||| || |||||| |||| ||||||
Sbjct 8690 AAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTACAACA 8749
Query 200990 TCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 201024
|||| || || |||||||| ||| | || ||||||
Sbjct 8750 TCCAAAAGGAATCTACTCTACACTTGGTCTTGAGA 8784
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178896299237225
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |