Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178255.1_202017-04- 21] 1,675 sequences; 11,916,863 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq36 140 4e-28 >seq36 Length=143289 Score = 140 bits (154), Expect = 4e-28 Identities = 336/504 (67%), Gaps = 12/504 (2%) Strand=Plus/Minus Query 159277 ATCACAGGGTTTGATTCTATATCATTACAACCTAACGCAGGATCACAGGGTGAGTATGCA 159336 || ||||| || ||| ||| || |||||||| || |||| | || ||||| ||| | Sbjct 129613 ATTACAGGTTTCGATGGTATTTCTTTACAACCAAATTCAGGTGCTCAAGGTGAATATACT 129554 Query 159337 GGACTGTTAGCAATCCAAGCATACCATCAAGGATCAGGAGATGATAAAAGAAATGTATGT 159396 || ||| || |||| | | |||| || | ||| || || | | || || ||| Sbjct 129553 GGTCTGAGAGTAATCAGATCCTACCTGGAAAGCAAAGGTGAAAATCATCGTAACGTGTGT 129494 Query 159397 TTGATACCAGAGTCAGCACATGGAACTAATCCTGCATCAGCAGTGATGGCAGGGATGAAA 159456 || || || | || || ||||| || ||||| || || || | ||||| || | ||| Sbjct 129493 TTAATCCCTGTATCCGCTCATGGTACAAATCCGGCTTCTGCCGCTATGGCGGGTTTAAAA 129434 Query 159457 GTTGTAGGTGTCAAGTGTGATGATGATGGCAACATAGACATCAAAGATCTAGAGAAGAAA 159516 ||||| |||||| ||| | |||||| |||| | || || |||| || Sbjct 129433 GTTGTTCCTGTCAACTGTTTGCAGGATGGCTCATTAGATCTGGTTGACTTAAAGAATAAG 129374 Query 159517 GCAATCATGAATA-CATTT----GAACTGTCATGTATTATGATTACATATCCATCTACAC 159571 || |||| | |||| ||||| | | ||||| || ||||| || || Sbjct 129373 GC-----TGAACAACATTCTAAAGAACTAGCCGCCGTAATGATCACCTATCCTTCCACTT 129319 Query 159572 ATGGTGTATTTGAAACAAACATCAGACA-GATATGTAAGATTGTTCATGAGAATGGTGGT 159630 | ||| |||||||| || |||| ||| | ||| | | || || ||| |||||| Sbjct 129318 ACGGTTTATTTGAACCAGGCATCCAACATGCTAT-TGATATCGTACATTCTTTTGGTGGA 129260 Query 159631 CAGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTAGGTCTAGCAAAACCATGTGAC 159690 || || ||| | |||||||| ||| | ||||| ||||| || ||| | ||| | || Sbjct 129259 CAAGTCTATTTGGATGGTGCTAATATGAATGCGCAGGTTGGGCTAACTTCACCCGGAGAT 129200 Query 159691 TATGGTGCAGATGTATGTCATCTAAACTTACATAAGACATTCTGTATTCCACATGGAGGT 159750 |||||||||||| || || | || |||||||||||||| | ||||| ||||| ||| Sbjct 129199 CTTGGTGCAGATGTTTGCCACTTGAATTTACATAAGACATTTTCCATTCCTCATGGTGGT 129140 Query 159751 GGAGGTCCTGGCGTAGGTCCTATT 159774 || ||||| | | || ||| ||| Sbjct 129139 GGTGGTCCAGCTGGAGCTCCCATT 129116 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588038887678000