Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178255.1_202017-04- 21] 1,675 sequences; 11,916,863 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq1277 114 2e-20 seq3 107 3e-18 >seq1277 Length=47777 Score = 114 bits (126), Expect = 2e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | || ||| | ||||| || || || || | || || ||| | | Sbjct 31877 TGCAAATTTTTGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCTG 31936 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | |||||| | || || || ||||| ||| || ||||| ||||| || ||||||| Sbjct 31937 ACACTATTGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCAAC 31996 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 ||||| | || ||||| ||||| ||| | || ||| ||||||| | | |||||||| | Sbjct 31997 AAAGATTGATCTTTGCCGGTAAGCAACTGGAAGATGGTAGAACGCTGTCTGATTATAACA 32056 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 | || ||||| || || | ||||| || || |||| ||||| |||| Sbjct 32057 TTCAGAAAGAGTCTACGTTGCATTTGGTGTTGAGATTGAGAGGTGGTA 32104 >seq3 Length=255791 Score = 107 bits (118), Expect = 3e-18 Identities = 152/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 146046 AAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACGATACTATTCAAAAT 146105 || || || || || || || || ||| | || || ||| | || |||||| | ||| Sbjct 2674 AAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATTGACAAT 2733 Query 146106 GTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAACAAAGACTCATTTTT 146165 || || || || ||| || ||||| || ||||| || ||||||||| | || ||| Sbjct 2734 GTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTGATCTTT 2793 Query 146166 GCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATATACAAAAAGAATCG 146225 || ||||| ||||| || || |||||| || | || || || || ||||||||||| Sbjct 2794 GCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAAAAGAATCC 2853 Query 146226 ACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 ||| | || ||||| || |||| ||||| |||| Sbjct 2854 ACTTTGCACTTAGTCTTGAGATTGAGAGGTGGTA 2887 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 786149939641000