Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178265.1_202017-04-
22] 2,475 sequences; 12,565,824 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq154 199 8e-46
seq578 178 3e-39
seq26 176 9e-39
seq29 172 1e-37
seq1200 168 1e-36
>seq154
Length=294421
Score = 199 bits (220), Expect = 8e-46
Identities = 176/220 (80%), Gaps = 0/220 (0%)
Strand=Plus/Plus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| |||||||| | || |||||||||| ||| |||||||| || || || || ||||
Sbjct 253959 TACCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAG 254018
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| | ||||||||||||| | ||| || ||||||||||| | ||||||||| || || |
Sbjct 254019 ACAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTG 254078
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
| || |||||||| ||||||||||||| || ||||| ||||| || ||| || ||| |
Sbjct 254079 GGATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAA 254138
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAA 82801
|||||||||| || ||||| || ||||| ||||| |||||
Sbjct 254139 CTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAA 254178
>seq578
Length=310
Score = 178 bits (196), Expect = 3e-39
Identities = 179/230 (78%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| |||||||| | || || || |||| ||||| |||||||| || ||||||||||
Sbjct 253 TACCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAG 194
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| || ||||||||||||| ||||| || || ||||| || | |||||||||||||||||
Sbjct 193 ACAGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAG 134
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTT-ACATTTTCAATCGTATCATTAGGTTCT 82760
| || |||||||| |||||||| ||| ||||| || || ||||| || || || |||
Sbjct 133 GAATACCTTCCTTGTCTTGAAT-TTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCA 75
Query 82761 ACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| || | ||||| ||||| ||||| | || || || || || |||||
Sbjct 74 ACCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 25
>seq26
Length=91611
Score = 176 bits (194), Expect = 9e-39
Identities = 171/220 (78%), Gaps = 0/220 (0%)
Strand=Plus/Minus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| ||||| || | || || || || | ||| ||||| || || || || || ||||
Sbjct 27556 TACCACCTCTTAATCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAG 27497
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
||||| ||||||||||||| | ||| || ||||||||||| | ||||||||| || || |
Sbjct 27496 ATAGAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTG 27437
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
| || |||||||| ||||| ||||| | || ||||| ||||| || ||| || ||| |
Sbjct 27436 GGATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAA 27377
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAA 82801
|||||||||| || ||||| || ||||| ||||| || ||
Sbjct 27376 CTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTAACGAA 27337
>seq29
Length=85701
Score = 172 bits (190), Expect = 1e-37
Identities = 158/200 (79%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 82614 GTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCA 82673
|| || || ||||| || || |||||||| || |||||||||||||||| || || ||
Sbjct 32254 GTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACCGTCTTCTAGCTGCTTACCG 32195
Query 82674 GCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTT 82733
|||||||| | |||||||||||||||||| || |||||||| |||||||| || | ||
Sbjct 32194 GCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTCTTGAATTTTCGACTTA 32135
Query 82734 ACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTC 82793
|| || || || ||||| || ||| |||||||| ||||| || || || ||||| |||
Sbjct 32134 ACGTTGTCGATGGTATCGGAAGATTCAACTTCCAATGTTATGGTTTTACCGGTCAAAGTC 32075
Query 82794 TTTACAAATATCTGCATTAT 82813
|| || || |||||||| ||
Sbjct 32074 TTGACGAAAATCTGCATAAT 32055
Score = 165 bits (182), Expect = 2e-35
Identities = 174/229 (76%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| |||||||| | || || ||||| ||||||||||| || || || || || ||||
Sbjct 32742 TACCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAG 32683
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| | |||||||||||||||| || || || |||||||| | || |||||||||||||
Sbjct 32682 ACAAGGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAG 32623
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
| || |||||||| || || || || | || || || || ||||| || | ||| |
Sbjct 32622 GGATACCTTCCTTGTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAA 32563
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
| || ||||| || || || || ||||| ||||| ||||| ||||||||
Sbjct 32562 CCTCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 32514
Score = 165 bits (182), Expect = 2e-35
Identities = 174/229 (76%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| |||||||| | || || ||||| ||||||||||| || || || || || ||||
Sbjct 32970 TACCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAG 32911
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| | ||||||| ||||||||||| || |||||||| || | ||| |||||||| ||||
Sbjct 32910 ACAAGGTTCTACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAG 32851
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
| || ||||| |||||||||||||| ||| || || ||||| || || || ||| |
Sbjct 32850 GGATACCTTCTTTATCTTGAATCTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAA 32791
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
| || | ||||| ||||| ||||| | || || || || || |||||
Sbjct 32790 CCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 32742
Score = 163 bits (180), Expect = 6e-35
Identities = 177/235 (75%), Gaps = 0/235 (0%)
Strand=Plus/Minus
Query 82576 ATCACCTACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTAT 82635
|||| |||| || ||||| | || || | ||| ||||| || || || || ||||| |
Sbjct 33204 ATCAGTTACCACCCCTCAACCTCAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGT 33145
Query 82636 AATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGAT 82695
| || || || ||||||| ||||||||||| || || ||||| || | |||||| || |
Sbjct 33144 AGTCCGACAGCGTTCTACCATCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGT 33085
Query 82696 CTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAG 82755
||||||| || |||||||| |||||||| || | || || || ||||| || ||| ||
Sbjct 33084 CTGGAGGAATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGAAG 33025
Query 82756 GTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||| || || | ||||| ||||| ||||||| ||||| ||||| || |||||
Sbjct 33024 ATTCAACCTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 32970
Score = 152 bits (168), Expect = 1e-31
Identities = 154/198 (78%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 82614 GTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCA 82673
|| || || ||||| || || |||||||| || |||||||||||||||| || || ||
Sbjct 32482 GTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACCGTCTTCTAGCTGCTTACCG 32423
Query 82674 GCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTT 82733
|||||||| | |||||||||||||||||| || |||||||| |||||||| ||| |||||
Sbjct 32422 GCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTCTTGAAT-TTTACTTTT 32364
Query 82734 -ACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGT 82792
|| || ||||| || || || ||| || || | ||||| ||||| ||||| | ||
Sbjct 32363 GACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTCTTCCCTGTTAGAGT 32304
Query 82793 CTTTACAAATATCTGCAT 82810
|| || || || |||||
Sbjct 32303 TTTGACGAAAATTTGCAT 32286
>seq1200
Length=195268
Score = 168 bits (186), Expect = 1e-36
Identities = 174/228 (76%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642
||| |||||||| | || || ||||| ||||||||||| || || || || || || ||
Sbjct 186411 ACCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGA 186470
Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702
| | ||||||| ||||| | ||| || ||||||||||| | ||||||||| || || ||
Sbjct 186471 CAAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 186530
Query 82703 TATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTAC 82762
|| |||||||| ||||| ||||| | || ||||| ||||| || ||| || ||| ||
Sbjct 186531 AATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 186590
Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||||| || || ||||| || || || ||||| || || || |||||
Sbjct 186591 TTCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCAT 186638
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 981796065339025
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |