Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178265.1_202017-04- 22] 2,475 sequences; 12,565,824 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq15 134 1e-26 seq1639 102 6e-17 >seq15 Length=181589 Score = 134 bits (148), Expect = 1e-26 Identities = 446/686 (65%), Gaps = 26/686 (4%) Strand=Plus/Minus Query 19246 GGAGGATTGAGTAAAGAGTTTTCTGAAATCTTTCGTAGAGCATTTGT--GTCGCGTGTTT 19303 || || ||| |||||||||| || |||| || | ||||| |||| |||| | ||| Sbjct 100830 GGTGGTTTGGATAAAGAGTTTACTAAAATTTTCAGAAGAGCGTTTGCAAGTCGAATCTTT 100771 Query 19304 TTTC-TGCAGATGTCATTAAACAATTGGGATGTAAACATGTTCGTGGACTTTTGCTTT-- 19360 || | ||| | || || || |||| | |||||| || |||||| | Sbjct 100770 CCTCCTTCAGTT---ATAGAAAAACTGGGTATTTCTCATGTTAAAGG---TTTGCTATTG 100717 Query 19361 -ATGGGCCACCGGGTTGTGGAAAAACATTAATTGCGAGAGAACTTAGTAAATTACTTA-- 19417 | || || || ||| ||| || || |||||||| ||| | || ||| | | || | Sbjct 100716 TACGGTCCTCCAGGTACTGGTAAGACCTTAATTGCAAGAAAGATTGGTACAATGCTGAAT 100657 Query 19418 -CAAAACAACCTCCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAA 19476 | ||| | || |||||| || |||||||| ||||| || | || || || ||| Sbjct 100656 GCTAAAGAGCC---CAAAATCGTCAATGGTCCAGAAATTTTGAGCAAGTACGTTGGTTCT 100600 Query 19477 TCGGAAGAAAATGTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAAAACGTTTAGGG 19536 || |||||||| | || ||| ||| || || |||| |||| | | | | |||| Sbjct 100599 TCAGAAGAAAACATTCGTAATTTATTTAAGGATGCAGAAGCAGAATATAGG-GCTAAGGG 100541 Query 19537 CGCAAAAG-TTCTTTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAG 19595 | || ||| || || ||||| || | ||||| |||| | | | ||||| || Sbjct 100540 TGAGGAATCTTCCTTACATATTATTATTTTCGATGAGCTGGATTCTGTTTTCAAGCAGAG 100481 Query 19596 AGGTTC------TGGTGTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAA 19649 |||||| || || | ||| ||| |||| ||| || |||||| | | | || Sbjct 100480 AGGTTCAAGAGGTGATGGTACTGGTGTAGGGGACAATGTAGTTAATCAATTGTTAGCTAA 100421 Query 19650 ATTAGACGGTGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGGA 19709 | | || |||||| | || ||||||||||||| |||||||| ||||| ||| | || Sbjct 100420 AATGGATGGTGTTGATCAGTTGAATAATATTTTGGTTATTGGTATGACCAATCGTAAAGA 100361 Query 19710 ATTAATAGACAGCGCCTTATTACGACCCGGTCGGTTGGAAATAAAGATCGAAATTAACTT 19769 ||||||||| | || | || || || ||| | || ||| | | | |||||| | || Sbjct 100360 TTTAATAGACGGTGCTCTTTTGCGTCCAGGTAGATTTGAAGTCCAAGTTGAAATTCATTT 100301 Query 19770 ACCCGATGAATGTGGACGTGTGGAAATTTTAAACATACATACATCAACCATGCGACAAAA 19829 |||||||||| ||| | | ||||||| |||| || || | ||| | |||| Sbjct 100300 ACCCGATGAAAAAGGAAGACTCCAAATTTTCGACATTCAGACGAAGAAAATGAGGGAAAA 100241 Query 19830 TAACCTTTTAAATGACGATGTAGATCTAGAAGAAATTGCAGCGGCTACCAAAAACTATAG 19889 ||| | | | |||||||| | ||| || | || || || ||||||| Sbjct 100240 TAATATGATGAGCGACGATGTTAACTTAGCTGAGTTAGCTGCATTAACAAAAAACTTCTC 100181 Query 19890 CGGCGCAGAACTTGAGGGATTAGTGA 19915 || || || ||||||| ||||||| Sbjct 100180 TGGTGCTGAGATTGAGGGTTTAGTGA 100155 >seq1639 Length=429093 Score = 102 bits (112), Expect = 6e-17 Identities = 359/561 (64%), Gaps = 45/561 (8%) Strand=Plus/Plus Query 40829 ATATTTGTCTAGCATAGGATTACAAGATAGGGATGAAGGTGATCTTGGTCCTGTTTATGG 40888 |||||| || || ||||| |||||||| | | ||| ||||| || || |||||||| Sbjct 120812 ATATTTAGATAAGATGGGATTCAAAGATAGGAAAGTAGGAGATCTGGGGCCCGTTTATGG 120871 Query 40889 ATTTCAGTCGCGACATTTTGGAGCAAAATATGACACTATGTACTCTGAT---TATACCAA 40945 |||||| | | | |||||||| || ||||| | || || | ||| ||||| Sbjct 120872 ATTTCAATGGAGGCATTTTGGTGCTAAATACAAGAC---GTGCGATGACGACTATACTGG 120928 Query 40946 TAAAGGAATGGATCAATT---ACAGTGCGTTATAGATACGATTAAATCCGATCCC---GA 40999 |||| || |||||||| |||| ||||| ||| | || | ||||| || Sbjct 120929 ACAAGGTATTGATCAATTGAAACAG---GTTATTCATAAACTAAAGACAAATCCCTACGA 120985 Query 41000 TAGCCGACGTATAATATTGTGCGCGTGGAACCCAACGGACGTACATTTGATGGCATTGCC 41059 ||| || || || || | || ||||||||| | || | | ||||| ||||| Sbjct 120986 TAGAAGA---ATCATTATGAGTGCCTGGAACCCAGCTGATTTTGACAAAATGGCTTTGCC 121042 Query 41060 ACCTTGTCATTTGTTATGTCAGTTTTACGTTTG------CAATG---GTGAA-------- 41102 || || ||| | || | ||||| || || | ||| | | ||| Sbjct 121043 GCCATGCCATATTTTTTCACAGTTCTATGTCAGTTTCCCCAAAGAAGGAGAAGGATCCGG 121102 Query 41103 ----------CTGTCATGTCAATTGTATCAAAGATCAGGTGACATGGGACTAGGGGTCCC 41152 || ||||| |||||| ||| | || |||| ||||| | || || || Sbjct 121103 TAAGCCCCGCCTTTCATGCTTATTGTACCAACGTTCTTGTGATATGGGGTTGGGAGTACC 121162 Query 41153 GTTTAACATAGCGAGTTATGCTCTGCTCACGTATATGATTGCACACGTTACCAATTTAAA 41212 |||||||| || |||||| || | || |||||||| | ||| | | | | Sbjct 121163 ATTTAACATTGCATCATATGCTTTGTTGACTAGAATGATTGCTAAAGTTGTCGACATGGA 121222 Query 41213 ACCTGGTGAATTTGTTCACACGTTAGGAGATGGACATATTTACATTAATCACATAGAGCC 41272 || ||||| || |||| || || || |||| |||| |||| | | ||||| || | Sbjct 121223 GCCAGGTGAGTTCATTCATACTTTGGGGGATGCACATGTTTATAAAGACCACATTGATGC 121282 Query 41273 GTTAACAGAACAACTGACACGAAAACCTAGACCATTTCCAACGCTACTTATTAAACGCGC 41332 || | ||||||| | || |||| || |||||||| || | ||| |||||| | | Sbjct 121283 CTTGAAAGAACAAATCACCAGAAATCCAAGACCATTCCCGAAACTAAAGATTAAAAGGGA 121342 Query 41333 TGTTGAAAACATTGATGATTT 41353 ||| || ||||||||||||| Sbjct 121343 CGTTAAAGACATTGATGATTT 121363 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397444011112375