Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178265.1_202017-04- 22] 2,475 sequences; 12,565,824 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq42 253 2e-62 >seq42 Length=360076 Score = 253 bits (280), Expect = 2e-62 Identities = 865/1335 (65%), Gaps = 30/1335 (2%) Strand=Plus/Plus Query 104266 AGACATTGATTCTGTCTTGGAGACATACGACAAGATGTCCC-AAGGTATGTTCATTCACG 104324 ||| || || ||| || || || || || |||||| | || ||| || | ||||| Sbjct 291778 AGATATCGAGGCTGCTTTAGAAACGTATAACTTGATGTCTCTAAAATATTTT-ACTCACG 291836 Query 104325 CAACACCAACCCTCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTA 104384 | | ||||| | |||||||| ||||| |||| ||| ||||||||| ||| ||| | Sbjct 291837 CCTCTCCAACGTTGTTCAATGCCGGTACTCCAAAACCTCAAATGTCCTCTTGTTTCTTGG 291896 Query 104385 TCGCCAACAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAA 104444 | |||| ||||||||||| ||| | || || || | || | | ||| ||||| | Sbjct 291897 TTGCCATGAAGGAGGACTCTATCGAGGGGATTTACGACACCTTGAAGGAATGTGCTTTGA 291956 Query 104445 TCTCAAAGTGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTC 104504 | || || ||||| |||||||| | || |||||| | | | | | | ||| Sbjct 291957 TTTCCAAAACTGCTGGTGGTATTGGTCTACATATCCATAACATTCGTTCAACTGGTTCTT 292016 Query 104505 GTATTCGGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACG 104564 ||| || ||||| ||| || | ||| | ||||| ||| |||| || || || Sbjct 292017 ACATTGCTGGTACAAACGGTACTTCTAACGGTTTAATTCCTATGATTCGTGTTTTCAATA 292076 Query 104565 CCACAGCGCGCTATGTAAATCAAGCTGGGCGTCGAAAG----GGATCTATCGCAGTCTAT 104620 ||| || || ||||| | || | ||| | |||| || | | || | || Sbjct 292077 ACACTGCCCGTTATGTTGACCAGGGTGGTAAT-AAAAGACCTGGTGCGTTTGCCCTTTAC 292135 Query 104621 CTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGAC 104680 || || |||||||| || ||||| | || || |||| | | ||||| ||| | Sbjct 292136 CTGGAACCATGGCATGCTGATATATTTGATTTTATTGATATTAGGAAGAACCACGGTAAA 292195 Query 104681 GAGGAGGCGCGGTGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAA 104739 ||||| | |||| | ||| | ||| | ||||| |||||||| ||||| |||||||| Sbjct 292196 GAGGAAATTC-GTGCAAGAGATTTGTTCCCTGCTCTATGGATTCCTGATCTTTTCATGAA 292254 Query 104740 GAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACA-AGGCACCTGGTCTCT 104798 | | || || || | ||| | ||| | | || | |||| ||| || |||||| | Sbjct 292255 GCGTGTCGAAGAAAATGGGACCTGGACATTATTCTCTCCA-ACATCAGCTCCTGGTTTAA 292313 Query 104799 CCGATGCCGTGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGG 104858 |||| ||||| |||||||| || || || || |||||| |||||||||| | Sbjct 292314 GCGATTGTTACGGTGACGAGTTTGAGGCTCTATATACCCGCTACGAGAAAGAAGGTCGTG 292373 Query 104859 CGACTGCGACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGA 104918 | ||| | ||| | | ||| | | ||| | | ||||||| || | Sbjct 292374 ---GTAAGACTATCAAAGCCCAAAAATTATGGTATTCCATTTTGGAAGCTCAAACTGAAA 292430 Query 104919 CTGGTACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATT 104978 |||||||||| | | | ||||||| || || |||||| ||| ||||||||| || | Sbjct 292431 CTGGTACACCTTTCGTTGTTTACAAGGATGCTTGTAACAGAAAATCTAATCAAAAAAACT 292490 Query 104979 TGGGTGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATG 105038 | ||||| |||||| || || | || ||||| | |||| ||| ||||| Sbjct 292491 TAGGTGTCATCAAGTCATCAAACTTATGCTGTGAAATTGTTGAATACTCAGCTCCAGATG 292550 Query 105039 AGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCC------------CAAGTATGTGG 105086 | || ||||| |||||| | || || | || | || | | || || Sbjct 292551 AAACTGCTGTTTGTAACTTGGCTTCCGTTGCCTTACCAGCATTCATTGAAACTTCTGAGG 292610 Query 105087 ATCCAGAGACAAAGACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCA 105146 || |||| |||| | | ||||| | || ||| || | ||| ||| || Sbjct 292611 ATGGTAAGACTTCCACATACAACTTCAAAAAATTACATGAAATTGCTAAAGTTGTTACTC 292670 Query 105147 AAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTA 105206 || |||||||||| |||||| | |||| ||||| ||||| || | ||||| | Sbjct 292671 GTAATTTAAACAGAGTCATTGATCGTAATTACTACCCTGTTGAAGAAGCGAGAAAATCCA 292730 Query 105207 ATATGAGACACCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTT 105266 |||||||||| | ||||||| | | |||||||| |||||||| || ||||| || | Sbjct 292731 ATATGAGACATAGACCAATTGCTTTGGGTGTTCAAGGTCTCGCTGACACTTTCATGCTGT 292790 Query 105267 GTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCA 105326 || |||||||||| || ||||| | ||| | || ||||| || | Sbjct 292791 TACGTTTGCCATTTGATTCTGAGGAAGCCCGTTTGCTAAATATCCAAATCTTTGAAACTA 292850 Query 105327 TGTATCACGCCGCTCTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAA 105386 | ||||| ||| | | || || || || | || || || |||||||| |||| Sbjct 292851 TTTATCATGCCTCCATGGAAGCTTCTTGTGAACTAGCTCAGAAGGACGGTCCATACGAAA 292910 Query 105387 CCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGA 105446 | || | || ||||| ||||| ||||| | || || ||||||||||||| | | | Sbjct 292911 CTTTCCAAGGATCTCCTGCTTCTCAAGGTATACTACAGTTTGATATGTGGG-ACCAAAAA 292969 Query 105447 CCAAGCTTCA-CTACGACTGGGAAGCTCTCAAGGAACG-CATCAAGGAGAAGGGTCTTCG 105504 || | || | || ||||| | || ||| || | |||| | || | ||| || | Sbjct 292970 CCCTACGGCATGTGGGATTGGGACAC-CTTAAGAAAAGATATCATGAAGCATGGTATTAG 293028 Query 105505 TAACAGTCTCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAA 105564 || || |||||| |||||||| || || ||||| | ||||| |||||| |||| Sbjct 293029 AAATTCCCTGACCATGGCACCAATGCCTACTGCATCCACATCCCAAATATTGGGTTATAA 293088 Query 105565 TGAATGCTTTGAACC 105579 |||||| || ||||| Sbjct 293089 TGAATGTTTCGAACC 293103 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583242755369000