Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178265.1_202017-04-
22] 2,475 sequences; 12,565,824 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq26 176 9e-39
seq1200 163 6e-35
seq154 159 7e-34
seq29 156 9e-33
seq578 138 2e-27
>seq26
Length=91611
Score = 176 bits (194), Expect = 9e-39
Identities = 159/200 (80%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950
|||| |||||| ||| ||| ||||||||||||||||||| || || | || || ||
Sbjct 27536 ACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAGAGTTCTACCGTCTTCC 27477
Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010
| ||| || || ||||||||||| | |||||||||| || ||||| ||||||||||||
Sbjct 27476 AATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTCTTGG 27417
Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070
||||| | || || | || || ||||| |||| ||| ||||| | |||||| ||||||
Sbjct 27416 ATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCCAAAGTGATGGTCTTA 27357
Query 283071 CCCGTCAAAGTCTTAACGAA 283090
|| |||||||||||||||||
Sbjct 27356 CCAGTCAAAGTCTTAACGAA 27337
>seq1200
Length=195268
Score = 163 bits (180), Expect = 6e-35
Identities = 153/195 (78%), Gaps = 0/195 (0%)
Strand=Plus/Plus
Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967
||| ||||||||||||||||| | | || | ||||| || | ||| || || |||||
Sbjct 186447 TTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACCATCTTCCAATTGCTTACCAGCAAA 186506
Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027
|||||| | |||||||||| |||||||| ||||||||||||||||| | || || |
Sbjct 186507 GATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGATCTTGGACTTGACATT 186566
Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087
|| |||||||| |||| ||| ||||| || || || |||||||| || |||||||| ||
Sbjct 186567 GTCAATAGTGTCAGAAGATTCAACTTCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGAC 186626
Query 283088 GAATATCTGCATTTT 283102
||| || ||||| ||
Sbjct 186627 GAAAATTTGCATCTT 186641
>seq154
Length=294421
Score = 159 bits (176), Expect = 7e-34
Identities = 154/195 (79%), Gaps = 2/195 (1%)
Strand=Plus/Plus
Query 282897 TGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTCTAGTTG 282955
|| || ||| ||||||||| ||||||||||||| |||| || | || || || | |||
Sbjct 253985 TGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGACAAG-GTTCTACCGTCTTCCAATTG 254043
Query 282956 TTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTT 283015
|| || ||||||||||| | |||||||||| || ||||| ||||||||||| |||||
Sbjct 254044 CTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTCTTGAATCTT 254103
Query 283016 TGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGT 283075
|| || || | || |||||||| |||| ||| ||||| | |||||| |||||||| ||
Sbjct 254104 TGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGTCTTACCAGT 254163
Query 283076 CAAAGTCTTAACGAA 283090
||||||||| || ||
Sbjct 254164 CAAAGTCTTGACAAA 254178
>seq29
Length=85701
Score = 156 bits (172), Expect = 9e-33
Identities = 152/193 (79%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 282908 TTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAA 282966
||| ||||||||||||||||||| |||| || | || || ||||| || || |||||||
Sbjct 32705 TTCCTTTTGGATGTTGTAGTCAGACAAG-GTTCTACCGTCTTCTAGCTGCTTACCGGCAA 32647
Query 282967 AGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGG 283026
||||||| | ||||| || || ||||| |||||||| ||||| || | || |||
Sbjct 32646 AGATCAACCTCTGTTGATCTGGAGGGATACCTTCCTTGTCCTGGATTTTCGACTTAACGT 32587
Query 283027 TATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAA 283086
||||||| ||||| || | ||| || || | |||||| || ||||| |||||||||||||
Sbjct 32586 TATCGATCGTGTCGGAGGATTCAACCTCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAA 32527
Query 283087 CGAATATCTGCAT 283099
| || ||||||||
Sbjct 32526 CAAAGATCTGCAT 32514
Score = 154 bits (170), Expect = 3e-32
Identities = 171/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
|||||| | || | || || |||||||| ||| || || || |||||||| ||||
Sbjct 32285 ACCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGA 32226
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||||| | || || ||||| || || |||||||||||||| | |||||| || ||
Sbjct 32225 CAGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGG 32166
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||||| ||||||||||| || || | || ||| | ||||| || || |||| ||| ||
Sbjct 32165 GATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAAC 32106
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||| | || || || ||||| ||||||||||| ||||| ||||||||
Sbjct 32105 TTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 32058
Score = 145 bits (160), Expect = 2e-29
Identities = 171/229 (75%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
|||||| | || | || || |||||||| ||| || || || |||||||| ||||
Sbjct 32513 ACCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGA 32454
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||||| | || || ||||| || || |||||||||||||| | |||||| || ||
Sbjct 32453 CAGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGG 32394
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTT-ACGGTATCGATAGTGTCCGAAGCTTCGA 283050
||||| ||||||||||| || ||| ||||| ||| | || |||||||| |||| ||| |
Sbjct 32393 GATACCTTCCTTGTCTTGAAT-TTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAA 32335
Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
| || || || || ||||| || || | ||| || ||||| || |||||
Sbjct 32334 CCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 32286
Score = 141 bits (156), Expect = 2e-28
Identities = 146/191 (76%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968
|| ||||| || |||||||| | ||||| | ||||| |||||||| || ||||||||
Sbjct 33160 TCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCATCTTCTAGTTGCTTACCGGCAAAA 33101
Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028
||||| | ||| ||||| |||||||| ||||||||||| || || | || ||| |
Sbjct 33100 ATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTG 33041
Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088
|| |||||||| |||| ||| || || || || || |||||||| |||| ||||| ||
Sbjct 33040 TCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACA 32981
Query 283089 AATATCTGCAT 283099
|| || |||||
Sbjct 32980 AAAATTTGCAT 32970
Score = 129 bits (142), Expect = 1e-24
Identities = 146/193 (76%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 282908 TTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAA 282966
||| ||||||||||||||||||| |||| || | ||||| |||||||| || || ||||
Sbjct 32933 TTCCTTTTGGATGTTGTAGTCAGACAAG-GTTCTACCATCTTCTAGTTGCTTACCAGCAA 32875
Query 282967 AGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGG 283026
| ||||| | ||||| || || ||||| || || ||||| ||||| ||| |||
Sbjct 32874 AAATCAATCTCTGTTGATCCGGAGGGATACCTTCTTTATCTTGAATCTTACTTTTGACGT 32815
Query 283027 TATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAA 283086
| || |||||||| |||| ||| || || || || || ||||| || || | ||| || |
Sbjct 32814 TGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGA 32755
Query 283087 CGAATATCTGCAT 283099
|||| || |||||
Sbjct 32754 CGAAAATTTGCAT 32742
>seq578
Length=310
Score = 138 bits (152), Expect = 2e-27
Identities = 158/210 (75%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950
|||| ||| ||||| ||||| || ||||| || |||| ||||| | || || ||
Sbjct 233 ACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGACAGCGTTCTACCGTCTTCC 174
Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010
||||| || |||||||| ||||| | |||||| || |||||||| |||||||||||
Sbjct 173 AGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGGAATACCTTCCTTGTCTTGA 114
Query 283011 ATCTTTGCTTTT-ACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTT 283069
|| ||| ||||| ||| | || |||||||| |||| ||| || || || || || |||||
Sbjct 113 AT-TTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTCTT 55
Query 283070 ACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| || | ||| || ||||| || |||||
Sbjct 54 CCCTGTTAGAGTTTTGACGAAAATTTGCAT 25
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046706006918650
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