Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178275.1_202017-04- 21] 583 sequences; 11,635,053 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq397 96.9 4e-15 >seq397 Length=39089 Score = 96.9 bits (106), Expect = 4e-15 Identities = 290/444 (65%), Gaps = 14/444 (3%) Strand=Plus/Plus Query 16955 AACATCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAA 17014 |||| || ||||| || ||| || || || |||||||| | ||| | |||||| ||| Sbjct 23769 AACAACAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATTCGTTGGAA 23828 Query 17015 AATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCA 17074 || || || ||||||||| | |||| || || ||||| || || | ||| || || || Sbjct 23829 AAGGTTAAACCGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAAAGGAACCG 23888 Query 17075 GAAAAGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCT 17134 || || || | ||| || | ||| ||||| || | || || ||| | || ||||| Sbjct 23889 GAGAAAAAGACACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCAAACAAGGCGTCA 23948 Query 17135 TTGTTACGAATCCATTTCTGCACCCACTCGGCTTTTT----GCTTTATGCAATCCATCGT 17190 || |||||||| | |||| ||||| || | | ||| || || || Sbjct 23949 GCGTCTTGAATCCATCTTAAAGCCCATTCGGCCTTCTCACCGATTTCTGGGATG----GT 24004 Query 17191 TTCTATGGCCTTAAATAAT--TTCTCTTTTTCCTGTAGG-TCGATTATATACGTATCGAT 17247 | ||||| || || || ||| |||| || |||| || | || || |||||||| Sbjct 24005 GTGAATGGCATTGAACAAGAATTCACTTT---CTTTAGGGTCCTTGATGTAAGTATCGAT 24061 Query 17248 GAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCA 17307 | | | ||| |||| ||||| || || || || || || || ||||| || | Sbjct 24062 CAACAAGGAGTAAGTTTCAGAGTGAATATTTTCAATCATGATTTGGAAACCGTAGAAACT 24121 Query 17308 TCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGAT 17367 || || | ||||| ||||| | |||| ||| | | ||||| || || || Sbjct 24122 CTTTGCCTCTGGAATTTGGACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACAAT 24181 Query 17368 GCCGTCGCTCGCGGCGAAAAACGC 17391 ||||| ||||||||||| || Sbjct 24182 ACCGTCAGAAGCGGCGAAAAAGGC 24205 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517541828386440