Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178275.1_202017-04- 21] 583 sequences; 11,635,053 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq39 138 1e-27 seq30 138 1e-27 seq6 134 1e-26 seq244 122 8e-23 >seq39 Length=185279 Score = 138 bits (152), Expect = 1e-27 Identities = 169/229 (74%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || |||||||| |||||||| | || || | ||||| || || ||| Sbjct 176732 ATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTGGAAGTTGAATCTTCT 176673 Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 |||||||| || || || ||| || ||| ||||| ||||| ||||||||||||| Sbjct 176672 GACACTATTGA--CAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGACC 176615 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 |||| | | || ||||| || || ||||| ||||||| | | ||| || ||| |||| Sbjct 176614 AACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTACA 176555 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 | || ||||| ||||| || ||||| || || | || | ||||| || Sbjct 176554 ACATCCAAAAGGAATCTACTCTACACTTGGTCTTGAGATTGAGAGGTGG 176506 >seq30 Length=55709 Score = 138 bits (152), Expect = 1e-27 Identities = 169/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || |||||||||||||||||| |||| ||| | ||||| || || || Sbjct 31464 ATGCAGATTTTCGTCAAGACTTTGACCGGTAAAACCATAACATTGGAAGTTGAATCTTCC 31523 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 || || ||||| | ||| | |||| ||| ||||| ||||| || || || || || Sbjct 31524 GATACCATCGACAACGTTAAGTCGAAAATTCA-AGACAAGGAAGGTATCCCTCCAGATCA 31582 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||| | | || |||||||| || || ||||||| | | | || || |||||||| Sbjct 31583 ACAAAGATTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACGCTGTCTGATTACAA 31642 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 ||||| || || ||||| ||||| | ||||||||||||||||| || Sbjct 31643 CATTCAGAAGGAGTCCACCTTACATCTTGTGCTAAGGCTAAGAGGTGG 31690 Score = 129 bits (142), Expect = 5e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| |||||||||||||||||| ||||||| | || || || || || Sbjct 31692 ATGCAGATCTTTGTTAAGACTTTGACCGGTAAAACCATCACTTTAGAGGTTGAATCCTCC 31751 Query 25059 GACACTATCGAGTCAC-TGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| ||||| | || | ||| |||||| ||||| ||||| || || || || || Sbjct 31752 GACACGATCGA-TAACGTTAAGTCGAAAATCCAGGACAAGGAAGGTATCCCTCCAGATCA 31810 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 |||| || | || |||||||| || || ||||||| | | | || || || ||||| Sbjct 31811 ACAGAGGTTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACCTTGTCTGACTACAA 31870 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || ||||| ||||| || || || || ||| | || | ||||| || Sbjct 31871 CATCCAAAAGGAATCTACTCTTCACTTGGTGTTGAGATTGAGAGGTGG 31918 Score = 118 bits (130), Expect = 9e-22 Identities = 150/204 (74%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| ||||| |||| ||||| | || || | || || || || ||| Sbjct 32604 ATGCAAATTTTTGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCT 32663 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 |||||||| || | ||| | |||| ||| ||||| ||||| ||||| || ||||| Sbjct 32664 GACACTATTGACAACGTTAAGTCGAAAATTCA-AGACAAGGAAGGTATTCCTCCAGACCA 32722 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 || | | ||||||||||| || ||| ||||||||| | | || || || ||||| Sbjct 32723 GCAAAGATTGATTTTTGCCGGTAAGCAACTAGAAGATGGTAGAACGCTGTCGGACTACAA 32782 Query 25178 TATTCAAAAAGAATCCACGCTACA 25201 ||||||||| || ||||| || || Sbjct 32783 TATTCAAAAGGAGTCCACTCTTCA 32806 Score = 91.5 bits (100), Expect = 1e-13 Identities = 161/231 (70%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || || ||| | || || || | || || | || || || || || Sbjct 31920 ATGCAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCC 31979 Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 |||||||| || |||| ||| |||| ||| ||||| ||||| ||||| || || Sbjct 31980 GACACTATTGACAACGTCAA--AAGTAAAAT-TCAA-GACAAGGAAGGTATTCCTCCAGA 32035 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 ||||| | | ||||||||||| || ||| | ||||| | | | || || ||||| Sbjct 32036 TCAACAAAGATTGATTTTTGCCGGTAAGCAACTGGAAGACGGTAGAACGCTGTCTGATTA 32095 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || ||||| ||||| || ||| | ||||| ||| | || | ||||| || Sbjct 32096 TAACATTCAGAAAGAGTCTACGTTGCATTTGGTGTTGAGATTGAGAGGTGG 32146 Score = 91.5 bits (100), Expect = 1e-13 Identities = 161/231 (70%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || || ||| | || || || | || || | || || || || || Sbjct 32148 ATGCAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCC 32207 Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 |||||||| || |||| ||| |||| ||| ||||| ||||| ||||| || || Sbjct 32208 GACACTATTGACAACGTCAA--AAGTAAAAT-TCAA-GACAAGGAAGGTATTCCTCCAGA 32263 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 ||||| | | ||||||||||| || ||| | ||||| | | | || || ||||| Sbjct 32264 TCAACAAAGATTGATTTTTGCCGGTAAGCAACTGGAAGACGGTAGAACGCTGTCTGATTA 32323 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || ||||| ||||| || ||| | ||||| ||| | || | ||||| || Sbjct 32324 TAACATTCAGAAAGAGTCTACGTTGCATTTGGTGTTGAGATTGAGAGGTGG 32374 >seq6 Length=282932 Score = 134 bits (148), Expect = 1e-26 Identities = 165/221 (75%), Gaps = 6/221 (3%) Strand=Plus/Minus Query 25008 TTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATC 25067 ||||| ||||||||||| ||||| ||||||| | ||||| || || ||||||||||| Sbjct 250967 TTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATT 250908 Query 25068 GAGTCACTG--AAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGG 25124 || || || ||| |||| | ||| ||||| ||||| || |||||||||||||| | Sbjct 250907 GA--CAATGTCAAGTCAAAGATTCAA-GACAAGGAAGGTATCCCACCTGACCAACAAAGA 250851 Query 25125 ATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAA 25184 | || ||||| || || ||||| ||||| | | | || || || ||||| |||||| Sbjct 250850 TTGATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAA 250791 Query 25185 AAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 ||||||||||| | || ||||| | || | ||||| || Sbjct 250790 AAAGAATCCACTTTGCACTTAGTCTTGAGATTGAGAGGTGG 250750 >seq244 Length=51925 Score = 122 bits (134), Expect = 8e-23 Identities = 160/220 (73%), Gaps = 4/220 (2%) Strand=Plus/Plus Query 25008 TTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATC 25067 || || ||||||||||| ||||| ||||||| | ||||| || || |||||||| || Sbjct 14480 TTCGTTAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACCATT 14539 Query 25068 GAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGA 25125 || || || ||| || ||| ||||| ||||| || |||||||||||||| | Sbjct 14540 GA--CAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGAT 14597 Query 25126 TTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAA 25185 | || ||||| || || ||||| ||||| | | | ||| | || ||||| || |||| Sbjct 14598 TGATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACTCTATCTGACTACAACATCCAAA 14657 Query 25186 AAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 | |||||||| ||||||| || | || ||||||| || Sbjct 14658 AGGAATCCACTTTACATTTGGTCTTGAGATTAAGAGGTGG 14697 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433324921069145