Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178285.1_202017-04-
21] 965 sequences; 11,764,749 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq6 89.7 8e-13
seq232 87.8 3e-12
>seq6
Length=228418
Score = 89.7 bits (98), Expect = 8e-13
Identities = 308/474 (65%), Gaps = 11/474 (2%)
Strand=Plus/Plus
Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935
||||| || |||||| | || || || | ||| | ||| ||||||| ||||| || ||
Sbjct 165215 CAGGGTGGTAATAAAAGACCTGGTGCGTTTGCCCTTTACCTGGAACCATGGCATGCTGAT 165274
Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCA---CGAGCCAGG 96992
| ||||| ||||| || || | || ||| || | |||||| | || || ||
Sbjct 165275 ATCTTTGATTTTATTGATATTAGGAAGAACCACGG---TAAAGAGGAAATTCGTGCAAGA 165331
Query 96993 GACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGACGGTGGC 97052
|| ||||| ||| || ||| | || ||| | ||||||||||| ||| | || |||
Sbjct 165332 GATTTGTTCCCTGCTCTATGGATTCCTGATCTTTTCATGAAGCGTGTCGAAGAAAATGGG 165391
Query 97053 TACTGGAGCCTAATGTGCCCCGAC-TCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGA 97111
||||| | | || | || || || | || ||| | |||||| | || || ||
Sbjct 165392 ACCTGGA-CATTATTCTCTCCAACATCAGCTCCTGGTTTAAGCGATTGTTACGGTGACGA 165450
Query 97112 GTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCGATACGTGAGACGAGTCGATGC 97171
||||||||| || || ||||||| |||| || || || |||| | || | ||
Sbjct 165451 GTTTGAGGCTCTATATACCCGCTACGAGAAAGAAGGTCG--TGGTAAGACTA-TCAAAGC 165507
Query 97172 ACGAGAACTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCT 97231
| | || | ||| | |||| || ||||| || ||||| || || | | || |
Sbjct 165508 CCAAAAATTATGGTATTCCATTTTGGAAGCTCAAACTGAAACTGGTACACCTTTCGTTGT 165567
Query 97232 CTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTC 97291
||||||||| | ||| | || || ||| |||| || ||||||| ||
Sbjct 165568 TTACAAGGATGCTTGTAATAGAAAATCTAATCAAAAAAACTTAGGTGTCATCAAGTCATC 165627
Query 97292 CAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTTG 97345
|| | ||| |||||||| || ||| | |||| || || || || |||||
Sbjct 165628 AAACTTATGCTGTGAAATTGTTGAATACTCAGCTCCAGATGAAACTGCTGTTTG 165681
>seq232
Length=542835
Score = 87.8 bits (96), Expect = 3e-12
Identities = 179/258 (69%), Gaps = 6/258 (2%)
Strand=Plus/Plus
Query 70033 TTTGGATTCGCTCGGCTTCACCGACAGACAAGAGGGCGATCTGGGGCCAGTGTACGGATT 70092
||| ||| | | || |||| || || ||| || ||||||||||| || || |||||
Sbjct 108884 TTTAGATAAGATGGGGTTCAAAGATAGGAAAGTAGGAGATCTGGGGCCCGTTTATGGATT 108943
Query 70093 CCAGTGGAGGCACTCGGGCACCAAGTATGTAGAC-TGCGA-GACAGACTATTCGGGTCAG 70150
|| |||||||| | || | || || |||| ||||| ||| |||||| | || ||
Sbjct 108944 TCAATGGAGGCATTTTGGTGCTAAATACA-AGACGTGCGATGAC-GACTATACTGGACAA 109001
Query 70151 GGTGTTGATCAATTGCAGACA-ATCATTGACACTCTCAAGACCAATCCAACAGATAGGAG 70209
||| ||||||||||| | ||| | ||| | | || ||||| ||||| ||||| ||
Sbjct 109002 GGTATTGATCAATTG-AAACAGGTTATTCATAAACTAAAGACAAATCCCTACGATAGAAG 109060
Query 70210 GATCGTAATGTGCTCATGGAATCCTGCAGATTTGCACCAAATGGCACTACCACCGTGTCA 70269
||| | ||| | | ||||| || || ||||| || ||||||| | || || || ||
Sbjct 109061 AATCATTATGAGTGCCTGGAACCCAGCTGATTTTGACAAAATGGCTTTGCCGCCATGCCA 109120
Query 70270 CTGTTTGGCTCAGTTTTA 70287
||| | ||||| ||
Sbjct 109121 TATTTTTTCACAGTTCTA 109138
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741050260973400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |