Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178285.1_202017-04-
21] 965 sequences; 11,764,749 total letters
Query= NC_005068.1
Length=110907
Score E
Sequences producing significant alignments: (Bits) Value
seq140 105 5e-18
seq654 100 2e-16
seq578 84.2 2e-11
>seq140
Length=229783
Score = 105 bits (116), Expect = 5e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTT 43953
||| ||||||||||| || ||||| ||||| || || ||||| || || || |||
Sbjct 8727 ACCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGA 8668
Query 43954 TAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013
|| | |||| |||||||| || || ||||| ||||| | ||| ||||| | ||
Sbjct 8667 CAAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 8608
Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073
| |||||| || ||| || || ||||| | ||| ||| || | | || ||
Sbjct 8607 AATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 8548
Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121
|| | ||||| || ||||||||||||||||| || || ||||||||
Sbjct 8547 TTCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCAT 8500
>seq654
Length=48736
Score = 100 bits (110), Expect = 2e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTT 43953
||| ||||||||||| ||||||||||| | ||| |||||| ||||| ||||||||
Sbjct 32141 ACCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGA 32082
Query 43954 TAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013
| | | || |||| ||| || || ||||| ||||| | ||| || || ||||
Sbjct 32081 CAGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGG 32022
Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073
| |||||| || ||| |||||| |||||| | ||| ||| || | | || ||
Sbjct 32021 AATACCTTCCTTGTCTTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAAC 31962
Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121
|| | || || || || || |||| ||| || || || ||||||||
Sbjct 31961 CTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 31914
Score = 82.4 bits (90), Expect = 5e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTT 43953
||| ||||||| ||| |||||||| || || || || ||||| || || || ||
Sbjct 32369 ACCACCTCTCAGTCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGA 32310
Query 43954 TAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013
|| | |||| || | ||| || || ||||| ||||| | || || ||| ||||
Sbjct 32309 CAAGGTTCTACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGG 32250
Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073
| ||||||||||||| ||| || |||||| | ||| ||| || | | || ||
Sbjct 32249 GATACCTTCTTTATCTTGAATCTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAAC 32190
Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121
|| | || || || || || |||| ||| || || || ||||||||
Sbjct 32189 CTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 32142
>seq578
Length=295883
Score = 84.2 bits (92), Expect = 2e-11
Identities = 150/219 (68%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTT 43953
||| ||||||||||| || || || || | ||| ||||||||||| || || ||
Sbjct 45841 ACCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGA 45782
Query 43954 TAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013
|| | | || |||||||| || || ||||| ||||| | ||| ||||| | ||
Sbjct 45781 CAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 45722
Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073
| |||||| || ||| ||| ||| ||||| | ||| ||| || | | || ||
Sbjct 45721 GATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 45662
Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAA 44112
|| | || || || ||||| || |||||||| |||||
Sbjct 45661 TTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAA 45623
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 354773427482820
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |