Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178285.1_202017-04-
21] 965 sequences; 11,764,749 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq140 141 8e-29
seq578 136 3e-27
seq654 134 1e-26
seq60 116 3e-21
>seq140
Length=229783
Score = 141 bits (156), Expect = 8e-29
Identities = 170/231 (74%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275
|||||||||||||| || || |||||||||||||| || | || || ||||| ||| |
Sbjct 8497 AAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTGGAAGTTGAATCT 8556
Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335
| || || | ||| || |||| || || ||||||||||| ||||||||||| ||
Sbjct 8557 TCTGACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGAC 8616
Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395
|||||| | | || ||||| || || || || || ||| | || | ||||| |||
Sbjct 8617 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTAC 8676
Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
||||| ||||| ||||| || |||| || || ||| ||||| | || |||
Sbjct 8677 AACATCCAAAAGGAATCTACTCTACACTTGGTCTTGAGATTGAGAGGTGGT 8727
>seq578
Length=295883
Score = 136 bits (150), Expect = 3e-27
Identities = 162/220 (74%), Gaps = 0/220 (0%)
Strand=Plus/Plus
Query 22227 TTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGT 22286
|||||| || ||||| || ||||| || ||||| | ||||| ||| | | || || |
Sbjct 45622 TTTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTAT 45681
Query 22287 GGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCT 22346
||| || |||| ||| |||||||||||||| ||||| ||||| || |||||| | |
Sbjct 45682 TGACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATT 45741
Query 22347 TATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406
|| ||||| || || || || || || | ||| | || || ||||||||||||||
Sbjct 45742 GATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAAA 45801
Query 22407 AGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
||||||||| | || ||||| ||| ||||| | || |||
Sbjct 45802 AGAATCCACTTTGCACTTAGTCTTGAGATTGAGAGGTGGT 45841
>seq654
Length=48736
Score = 134 bits (148), Expect = 1e-26
Identities = 152/204 (75%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| ||||| || || ||||| ||||||||||| | || | ||||| ||| | ||
Sbjct 31458 ATGCAGATTTTCGTCAAGACTTTGACCGGTAAAACCATAACATTGGAAGTTGAATCTTCC 31517
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|||||| | ||| | | || ||||||||||||||||| ||||| || || ||||||
Sbjct 31518 GATACCATCGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATCCCTCCAGATCAA 31577
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||| | | || |||||||| || ||| |||| || | || | || |||||||||
Sbjct 31578 CAAAGATTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACGCTGTCTGATTACAAC 31637
Query 22399 ATTCAAAAAGAATCCACCATACAT 22422
||||| || || |||||| |||||
Sbjct 31638 ATTCAGAAGGAGTCCACCTTACAT 31661
Score = 127 bits (140), Expect = 2e-24
Identities = 165/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||||||||| || |||||| |||| || || || | || || || || ||| | ||
Sbjct 31914 ATGCAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCC 31973
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| | ||||| ||||||||||||||||| |||||||| || ||||||
Sbjct 31974 GACACTATTGACAACGTCAAAAGTAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCAA 32033
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||| | | || |||||||| || || | || || | || | || ||||| |||
Sbjct 32034 CAAAGATTGATTTTTGCCGGTAAGCAACTGGAAGACGGTAGAACGCTGTCTGATTATAAC 32093
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
||||| ||||| || || | ||||| || ||| ||||| | || |||
Sbjct 32094 ATTCAGAAAGAGTCTACGTTGCATTTGGTGTTGAGATTGAGAGGTGGT 32141
Score = 123 bits (136), Expect = 2e-23
Identities = 164/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || |||||||| ||||| ||||||||||| ||||| | || || ||| || ||
Sbjct 31686 ATGCAGATCTTTGTTAAGACTTTGACCGGTAAAACCATCACTTTAGAGGTTGAATCCTCC 31745
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | || | | || ||||| || |||||||| ||||| || || ||||||
Sbjct 31746 GACACGATCGATAACGTTAAGTCGAAAATCCAGGACAAGGAAGGTATCCCTCCAGATCAA 31805
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | | || |||||||| || ||| |||| || | ||| | || || ||||||
Sbjct 31806 CAGAGGTTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACCTTGTCTGACTACAAC 31865
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| ||||| ||||| || | || || || ||| ||||| | || |||
Sbjct 31866 ATCCAAAAGGAATCTACTCTTCACTTGGTGTTGAGATTGAGAGGTGGT 31913
Score = 105 bits (116), Expect = 6e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||||||||| || |||||| |||| || || || | || || || || ||| | ||
Sbjct 32142 ATGCAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCC 32201
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| | ||||| || |||||||| || || ||||| || || ||||||
Sbjct 32202 GACACTATTGACAACGTCAAAAGTAAGATTCAAGATAAAGAAGGTATCCCTCCGGATCAA 32261
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | | || ||||| || || || |||| ||| | ||| | || || ||||||
Sbjct 32262 CAGAGATTGATTTTTGCTGGTAAGCAACTAGAAGATGGTAGAACCTTGTCTGACTACAAC 32321
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| ||||| ||||| || | || || || ||| || || | || |||
Sbjct 32322 ATCCAAAAGGAATCTACTCTTCACTTGGTGTTGAGACTGAGAGGTGGT 32369
Score = 96.9 bits (106), Expect = 3e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||||||||| || || | || ||||| || | || || || || ||| | |
Sbjct 32370 ATGCAAATTTTTGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCT 32429
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| | | || ||||||||||||||||| |||||||| || || ||
Sbjct 32430 GACACTATTGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATTCCTCCAGACCAG 32489
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||| | | || |||||||| || || |||| ||| | || | || || |||||
Sbjct 32490 CAAAGATTGATTTTTGCCGGTAAGCAACTAGAAGATGGTAGAACGCTGTCGGACTACAAT 32549
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|||||||| || ||||| | || | || ||| | ||| | || |||
Sbjct 32550 ATTCAAAAGGAGTCCACTCTTCACCTCGTCTTGAGGTTGAGGGGTGGT 32597
>seq60
Length=15309
Score = 116 bits (128), Expect = 3e-21
Identities = 151/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 22228 TTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTG 22287
|| ||||| ||||| || ||||| || ||||| | ||||| ||| | | || ||| |
Sbjct 818 TTCGTTAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACCATT 759
Query 22288 GACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTT 22347
||| || |||| || || ||||||||||| ||||| ||||| || |||||| | |
Sbjct 758 GACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTG 699
Query 22348 ATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAA 22407
|| ||||| || || || || || || | || | || || |||||||| |||||
Sbjct 698 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACTCTATCTGACTACAACATCCAAAAG 639
Query 22408 GAATCCACCATACATTTAGTTTTGCGATT 22436
|||||||| ||||||| || ||| ||||
Sbjct 638 GAATCCACTTTACATTTGGTCTTGAGATT 610
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419723063605225
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |