Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178285.1_202017-04-
21] 965 sequences; 11,764,749 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq6 105 7e-18
seq578 87.8 2e-12
>seq6
Length=228418
Score = 105 bits (116), Expect = 7e-18
Identities = 287/437 (66%), Gaps = 7/437 (2%)
Strand=Plus/Plus
Query 93892 GCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTG 93951
||| | || || ||||||| || || || || || || ||||| || |||||| ||
Sbjct 164954 GCCTCTCCAACGTTGTTCAATGCCGGTACTCCAAAACCTCAAATGTCCTCTTGTTTCTTG 165013
Query 93952 ATGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACC 94011
| | | |||| ||||| ||| || |||| ||||| | | ||||| |||||
Sbjct 165014 GTTGCCATGAAGGAGGACTCTATCGAGGGGATTTACGACACCTTGAAGGAATGTGCTTTG 165073
Query 94012 ATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCC 94071
|| || ||| || || || || || | | |||| || | ||| | | |||||
Sbjct 165074 ATTTCCAAAACTGCTGGTGGTATTGGTCTACATATCCATAACATTCGTTCAACTGGTTCT 165133
Query 94072 TACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAAC 94131
||||| ||||| || || || || ||||| | | |||||| | || || |||||
Sbjct 165134 TACATTGCTGGTACAAACGGTACTTCTAACGGTTTAATTCCTATGATTCGTGTTTTCAAT 165193
Query 94132 AACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTAT 94191
||| | || || || || |||||||||||| | || ||| | || || | ||
Sbjct 165194 AACACTGCCCGTTATGTTGACCAGGGTGGTAATAAAAGACCTGGTGCGTTTGCCCTTTAC 165253
Query 94192 CTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAAC 94251
|| || || ||||| || || | | ||| || || | | ||||||||||| ||
Sbjct 165254 CTGGAACCATGGCATGCTGATATCTTTGATTTTATTGATATTAGGAAGAACCACGGTAAA 165313
Query 94252 GATCTGGAGA---GGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATG 94308
|| ||| | | || ||||| | ||| ||||| ||| | || || ||||| |||
Sbjct 165314 GA---GGAAATTCGTGCAAGAGATTTGTTCCCTGCTCTATGGATTCCTGATCTTTTCATG 165370
Query 94309 AAACGCGTCG-AGAAAA 94324
|| || |||| ||||||
Sbjct 165371 AAGCGTGTCGAAGAAAA 165387
>seq578
Length=295883
Score = 87.8 bits (96), Expect = 2e-12
Identities = 209/316 (66%), Gaps = 0/316 (0%)
Strand=Plus/Minus
Query 93896 CCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGA 93955
|||| || | |||||||| || || || || || |||||||| |||||| | ||
Sbjct 211721 CCCCAACTTTATTCAACGCTGGTACGCCACATCCTCAAATGTCTTCATGTTTCTTAATTG 211662
Query 93956 CGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCT 94015
| | |||| ||||| ||| || |||| || | | || || ||||| | || |
Sbjct 211661 CCATGAAGGATGACTCTATCGAAGGTATTTATGATACTTTGAAAGAATGTGCTATGATTT 211602
Query 94016 CAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACA 94075
| ||| || || || | || | | || || || | ||| ||| ||||| || |
Sbjct 211601 CCAAAACTGCAGGTGGTGTTGGTCTTCATATCAACAACATCCGTTCCACAGGTTCTTATA 211542
Query 94076 TCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACG 94135
|| |||||||| || || || ||||| | | |||||| | || || ||||| ||
Sbjct 211541 TCGCTGGTACCAACGGTACTTCAAACGGGTTGATTCCTATGATTCGTGTTTTCAATAATA 211482
Query 94136 CGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCG 94195
| || || || ||||||||||||||| | ||| ||| ||||||| | | | |
Sbjct 211481 CTGCCCGTTATGTGGACCAGGGTGGTAACAAGAGACCTGGTGCTTTCGCCCTTTTCTTGG 211422
Query 94196 AGCCCTGGCACGCGGA 94211
|||| ||||| || ||
Sbjct 211421 AGCCATGGCATGCAGA 211406
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494717232401400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |