Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178285.1_202017-04- 21] 965 sequences; 11,764,749 total letters Query= NC_028683.1 Length=177643 Score E Sequences producing significant alignments: (Bits) Value seq717 82.4 9e-11 >seq717 Length=8695 Score = 82.4 bits (90), Expect = 9e-11 Identities = 154/224 (69%), Gaps = 3/224 (1%) Strand=Plus/Minus Query 139399 TTTATGTCAAATGAGCCATTCAATTCTGGGTCGTTAATGAAACCTTTCCAACCTACAGTT 139458 ||||| | ||| ||| ||||| || ||||||||||| || |||||||| || ||||| Sbjct 2966 TTTATTTGAAAAGAGTTATTCATATCAGGGTCGTTAATCAACCCTTTCCAGCCAACAGTA 2907 Query 139459 GTTCTTGGTTTCTCAAAATAAACACGCATAACCA-AAAGAAG--ATTTGGAAATTGTTTT 139515 || |||||||| || ||||| | | ||||| | || ||| |||| || | || | Sbjct 2906 GTCCTTGGTTTTTCTAAATACGCTCTCATAATAATCAATAAGTCTTTTGACAACTTTTCT 2847 Query 139516 TGTACTTCGGCTAAACGTTCGCCGTATTCGAGAGCAGCTTTAGGGTCATGAATTGAACAA 139575 | || || || | || |||| ||| ||| ||||| |||||||| | ||||| Sbjct 2846 GAAATTTTAGCCAATCTGTCAGCGTAATCGTAAGCGGCTTTGGGGTCATGTAGGGAACAT 2787 Query 139576 GGGCCTACAACAATAATTTTGCGTGGGTCTTCGCCATTCATAAT 139619 || || | || |||| | || |||| ||||||| ||| Sbjct 2786 GGCCCGATCACGATAACTAAACGATCATCTTTACCATTCAAAAT 2743 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 568322744524200