Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178285.1_202017-04-
21] 965 sequences; 11,764,749 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq140 116 9e-21
seq654 114 3e-20
seq60 100 7e-16
>seq140
Length=229783
Score = 116 bits (128), Expect = 9e-21
Identities = 153/211 (73%), Gaps = 1/211 (0%)
Strand=Plus/Minus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| || |||||||| || |||||||||||||| |||| |||||||| |||||||| |
Sbjct 8706 CAAG-TGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACCATCTTCCA 8648
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
|| || || ||||| | || || ||||| | | || |||||||| ||||| |
Sbjct 8647 ATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGA 8588
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076
| || |||||| | || | |||| ||| || ||||| || |||||||| || |
Sbjct 8587 TCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAGGGTAATAGTCTTAC 8528
Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
| || | |||||| ||||| | ||||| ||
Sbjct 8527 CGGTTAAAGTCTTGACGAAAATTTGCATCTT 8497
>seq654
Length=48736
Score = 114 bits (126), Expect = 3e-20
Identities = 151/208 (73%), Gaps = 1/208 (0%)
Strand=Plus/Minus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| ||||||||||| || |||||||||||||| || | || ||||| ||||||||||
Sbjct 32348 CAAG-TGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCATCTTCTA 32290
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
| || || || || || | ||||| || |||| | ||| ||||| || |||||||
Sbjct 32289 GTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGGATACCTTCTTTATCTTGAA 32230
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076
| || |||||| | || | |||| ||| || || || || || ||||| || |
Sbjct 32229 TCTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTCTTCC 32170
Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104
| || ||||| || ||||| | |||||
Sbjct 32169 CTGTTAGAGTTTTGACGAAAATTTGCAT 32142
Score = 111 bits (122), Expect = 4e-19
Identities = 150/208 (72%), Gaps = 1/208 (0%)
Strand=Plus/Minus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| ||||||||||| || |||||||||||||| || | || ||||| || |||||||
Sbjct 31892 CAAG-TGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCGTCTTCTA 31834
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
| || ||||| ||||| | |||||| || || | | ||| |||||||| || || |
Sbjct 31833 GCTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGGGATACCTTCCTTGTCCTGGA 31774
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076
|||| || || | || | |||| || || || || | ||| || ||||| |
Sbjct 31773 TTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACCTCTAAAGTGATGGTTTTAC 31714
Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104
| || | |||||| || |||| ||||||
Sbjct 31713 CGGTCAAAGTCTTAACAAAGATCTGCAT 31686
Score = 105 bits (116), Expect = 2e-17
Identities = 156/221 (71%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943
|| || || || |||||||| | || ||||| || || ||||||||||| | | |||
Sbjct 31678 CTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTT 31619
Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003
|| || |||||||| || ||||| ||||| | || || || || | | ||| |||
Sbjct 31618 CTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCT 31559
Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063
||||| ||||||||||| || || | || | | | || ||| || ||||| |
Sbjct 31558 TCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAAT 31499
Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || ||||| || || | |||||| ||||| | ||||||
Sbjct 31498 GTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 31458
Score = 100 bits (110), Expect = 7e-16
Identities = 148/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 151895 GACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTC 151954
||| || |||||||| ||||| ||||| || ||||| || | | ||||| ||||||||
Sbjct 32579 GACGAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCATCTTC 32520
Query 151955 TAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTG 152014
||| || ||||| || || | || |||||||| | | || |||||||| |||||
Sbjct 32519 TAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGTCTTG 32460
Query 152015 AATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTT 152074
|||||| || || | || | |||| ||| || || || || || ||||| ||
Sbjct 32459 AATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATAGTCTT 32400
Query 152075 GCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || ||||| || || | |||||
Sbjct 32399 ACCTGTCAGTGTCTTGACAAAAATTTGCAT 32370
Score = 89.7 bits (98), Expect = 1e-12
Identities = 138/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 151908 GTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCG 151967
||||||||||| || ||||| ||||| | | ||||| || ||||| || || |||
Sbjct 32110 GTAGACTCTTTCTGAATGTTATAATCAGACAGCGTTCTACCGTCTTCCAGTTGCTTACCG 32051
Query 151968 GCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTG 152027
|| || || | || || || || | | || |||||||| ||||||||||| ||||
Sbjct 32050 GCAAAAATCAATCTTTGTTGATCTGGAGGAATACCTTCCTTGTCTTGAATTTTACTTTTG 31991
Query 152028 ACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTC 152087
|| | || | |||| ||| || || || || || ||||| || || || |||||
Sbjct 31990 ACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTCTTCCCTGTTAGAGTT 31931
Query 152088 TTCACGAAGACCTGCAT 152104
|| ||||| | |||||
Sbjct 31930 TTGACGAAAATTTGCAT 31914
>seq60
Length=15309
Score = 100 bits (110), Expect = 7e-16
Identities = 147/208 (71%), Gaps = 0/208 (0%)
Strand=Plus/Plus
Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948
||| | ||| | ||| | ||| || || |||||||||||||| || | || |||||| ||
Sbjct 612 TCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAGAGTTCTACC 671
Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008
||||| | || || || ||||| | || || ||||| | | ||| ||||||||
Sbjct 672 GTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTT 731
Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAAT 152068
||||| || || |||||| | || | | |||| ||| || ||||| | ||| ||
Sbjct 732 GTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCCAAAGTGAT 791
Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAAG 152096
|| || || || | |||||| ||||||
Sbjct 792 GGTCTTACCAGTCAAAGTCTTAACGAAG 819
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153806534087515
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |