Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178295.1_202017-04-
21] 2,127 sequences; 12,105,808 total letters
Query= NC_005179.1
Length=134721
Score E
Sequences producing significant alignments: (Bits) Value
seq1 179 3e-40
>seq1
Length=516214
Score = 179 bits (198), Expect = 3e-40
Identities = 562/857 (66%), Gaps = 39/857 (5%)
Strand=Plus/Plus
Query 12842 TTTGACATAACAGACATTTTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTT 12901
|| ||||||||| ||||| || || |||||| ||||| || ||||| || ||
Sbjct 280146 TTGGACATAACACCAGCCTTTTGGTAGTCAGAAACTCTCTTTTCGAAGAAGTTAGTCTTA 280205
Query 12902 CCTTCTAACGAAATATTTTCCATAAAATCGAAAGGATTTTTCGA-ACAATAGTATTTTTT 12960
|| | || || || |||||||| |||||||| || |||| ||| | |||||||| ||
Sbjct 280206 CCGGCCAAGGAGATGTTTTCCATGAAATCGAAGGGGTTTT-CGACATTGTAGTATTTCTT 280264
Query 12961 ACACCCTAATTCTAGTAACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAATC 13020
|| || | | |||| |||||| || || ||||| | ||| || |||||||| ||
Sbjct 280265 GTTACCGAAAGCGACCAACAGTCTGTCGGCGACGAACTCAACGTATTGGTTCATTAAGTC 280324
Query 13021 ACAGTTCATTCCTATTAATTTTACAGGCATAGCTTCTGTTAAAAAGt---ttttttCTAT 13077
| |||||| |||| || || || | || || || |||| ||| ||| ||
Sbjct 280325 AGCGTTCATACCTAGCAAAGCAACTGGTAAGGCGTCC---AAGAAGTATCTTTGTTCAAT 280381
Query 13078 ATCAACTGCTTCGATAACTATGTCTCTTATTACGTTCTCTAATGGAGGATTTGAT----A 13133
|| || || ||| | || || | | | | ||| | || || |||| | |
Sbjct 280382 TTCCACAGCCTCGGTGACAATTTTT-TCA--ACGATGGCTGGGTCTGG-TTTGTTCTTCA 280437
Query 13134 GATGCTTAAACATCATACATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCT 13193
||| |||| || |||||||| || |||||| ||||| ||||||| || | |
Sbjct 280438 AATGGGCGAACAACAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATT 280497
Query 13194 CGTTTGAAAATGTTAGACCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAA 13253
|||| ||||| |||| ||| ||||| | |||| ||||| | ||| || || | ||||
Sbjct 280498 CGTTGGAAAAGGTTAAACCGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAA 280557
Query 13254 ACGAACCCGaaaaaaaTATTCCTTCAACTGCTGCAAACGCTATCAACCTTTCACCATACG 13313
| ||||| || ||||| | ||||||| | ||||| || | | ||||||||| ||
Sbjct 280558 AGGAACCGGAGAAAAAGACACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCAAACA 280617
Query 13314 TACTATTTTTACTCTCTA-TCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTC 13372
| | ||| | |||| || ||||| | || || | || | |||
Sbjct 280618 -AGGCGTCAGCGTCTTGAATCCATCTTAAAGCCCATTCGGCCTTCTC----ACCGATTTC 280672
Query 13373 ----ATATTTTCTATTGCGTTAAATAAATAAtttttttCCTTACTGTCTAAAATATAAGT 13428
|| | | || || || || || | | |||| ||| ||| || |||||
Sbjct 280673 TGGGATGGTGTGAATGGCATTGAACAAGAATTCACTTTCTTTAGGGTCCTTGATGTAAGT 280732
Query 13429 ATCTATCAATAAGCTATACATTTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATA 13488
||| ||||| ||| || |||| || ||||||||||| ||| ||||||||||| ||
Sbjct 280733 ATCGATCAACAAGGAGTAAGTTTCAGAGTGAATATTTTCAATCATGATTTGGAAACCGTA 280792
Query 13489 AAAACATCTAGCCTCTGATACCTGAACTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTT 13548
|||| | ||||||| | || ||||||| | | || |||| | |||||||| ||
Sbjct 280793 GAAACTCTTTGCCTCTGGAATTTGGACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATT 280852
Query 13549 AACTATCCCGTCACTAGCAGCaaaaaaaGCAAG---TATGTGCTTAATAAAt---ttttt 13602
||| || |||||| ||| || ||||| ||||| | || | | |||| | ||
Sbjct 280853 AACAATACCGTCAGAAGCGGCGAAAAAGGCAAGAACTCTGGAAATGAAAAATCTCTCGTT 280912
Query 13603 ttCGTT--TTCTGACAACTTTAACCAATCTGGAAAATCTTTTGATAAATCTACCTCCTCA 13660
||||| ||||| || ||| || | | ||| || || ||||| | || |||
Sbjct 280913 CTCGTTCATTCTG-----TTGTTCCAGTCATGGATATCCTTAGACAAATCAATTTCTTCA 280967
Query 13661 ACGGTCCAAAAAGAAGC 13677
||||||| ||||||||
Sbjct 280968 GCGGTCCAGAAAGAAGC 280984
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430971227724054
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |