Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178305.1_202017-04- 22] 3,318 sequences; 12,557,627 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq1127 168 5e-37 >seq1127 Length=497743 Score = 168 bits (186), Expect = 5e-37 Identities = 373/560 (67%), Gaps = 31/560 (6%) Strand=Plus/Minus Query 96996 AAACTTTAGTGTTGGGAAAGGCCTGGGAGTTCGCGTAAGCTGCTCTGTGAGAGCATCAAT 97055 || ||||||| | ||||| || || ||| ||| || | || ||| | | |||||||| Sbjct 57198 AATCTTTAGTTTCGGGAATGGTCTTGGATTTCTGGTGATTTGTTCTTTCAAGGCATCAAT 57139 Query 97056 GTGATTCACATAAATGTGAGCATCTCCTAAAGTGTGAATAAATTCTCCAGGAACTAAATC 97115 ||| | ||||| || ||||| || ||||| ||||| || || || || | | || Sbjct 57138 GTGGTCTTTATAAACATGTGCATCCCCCAAAGTATGAATGAACTCACCTGGCTCCATGTC 57079 Query 97116 AGTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCC 97175 || | || ||||| | ||| || | || ||| ||||||||||| || || || Sbjct 57078 GACAACTTTAGCAATCATTCTAGTCAACAAAGCATATGATGCAATGTTAAATGGTACTCC 57019 Query 97176 TAGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAG-----------------C 97218 | ||||||||| || | ||| || || || ||||| | Sbjct 57018 CAACCCCATATCACAAGAACGTTGGTACAATAAGCATGAAAGGCGGGGCTTACCGGATCC 56959 Query 97219 TT-TCCATC---------ACACACATAAAACTGACTCAATACATGACAGGGGGGCAACGC 97268 || ||| || || ||||| ||||| || | ||| || || ||||| || Sbjct 56958 TTCTCCTTCTTTGGGGAAACTGACATAGAACTGTGAAAAAATATGGCATGGCGGCAAAGC 56899 Query 97269 CATTTTTGGAACATCTAAGACATTCCAAGCACACATCAACATTCTTCTATCGGTTGGGTT 97328 |||||| || ||| ||||| |||| ||| | |||||||||||| || || Sbjct 56898 CATTTTGTCAAAATCAGCTGGGTTCCAGGCACTCATAATGATTCTTCTATCGTAGGGATT 56839 Query 97329 TGTGTGTATGGTATTAATTATCTGCTTTAATTGATCAACGCCTTCTCCACCATAATTGTG 97388 ||| | || ||| ||| | ||| || |||||||||| |||| |||| ||| | || Sbjct 56838 TGTCTTTAGTTTATGAATAACCTGTTTCAATTGATCAATACCTTGTCCAGTATAGTCGT- 56780 Query 97389 CTTAAGAC--CTTGATATTCTGCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCA 97446 | | || |||| |||| || ||||||||||||||||| ||||||||||| || || Sbjct 56779 CATCGCACGTCTTG-TATTTAGCACCAAAATGCCTCCATTGAAATCCATAAACGGGCCCC 56721 Query 97447 AGGTCTCCTTCTTCTCTATCACAGAAACCAAGCTTATCTAAATAGGACCTAGATCCATTT 97506 || |||||| ||| ||||| ||| || | |||||||||||| | ||||||||| Sbjct 56720 AGATCTCCTACTTTCCTATCTTTGAACCCCATCTTATCTAAATATTCACGAGATCCATTA 56661 Query 97507 GCATCCCAAATGTGCACACC 97526 | |||||||| | ||||| Sbjct 56660 CCGTCCCAAATCTTAACACC 56641 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346769976705260