Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178305.1_202017-04-
22] 3,318 sequences; 12,557,627 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq2378 140 3e-28
seq1163 123 2e-23
seq20 84.2 2e-11
seq22 82.4 7e-11
>seq2378
Length=83904
Score = 140 bits (154), Expect = 3e-28
Identities = 162/216 (75%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
|||||||| || || || || |||||||||||||| || || || | |||| || |
Sbjct 49819 CTCAACACCAGGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCA 49878
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| || | ||| || || || | ||||||| || || ||||| || || |||||||||
Sbjct 49879 TCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGGATACCTTCTTTA 49938
Query 45246 TCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304
||||||||||| ||||| || | || | ||||||||||| || || || || || |
Sbjct 49939 TCTTGAATTTTACTTTTGA-CGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTAT 49997
Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || || ||||||||||| || |||||||||||
Sbjct 49998 AGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 50033
Score = 114 bits (126), Expect = 1e-20
Identities = 157/217 (72%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 45125 CCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGA 45184
|||||| || || || || || || |||||||| ||||| || || | ||| ||
Sbjct 49590 CCTCAAGACGAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACC 49649
Query 45185 ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTT 45244
||| || | |||||| || || | ||||||| ||||||||| || ||||| ||||| ||
Sbjct 49650 ATCTTCTAGTTGTTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTT 49709
Query 45245 ATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAA 45303
||||||| |||||| | | || | || | ||||| ||||| || || || || || |
Sbjct 49710 GTCTTGAA-TTTTTGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTA 49768
Query 45304 CCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || || || || || || || |||||||||||
Sbjct 49769 TAGTCTTACCTGTCAGTGTCTTGACGAAAATTTGCAT 49805
Score = 98.7 bits (108), Expect = 9e-16
Identities = 153/216 (71%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
|||||||| | ||||| ||| || || || || || |||||||| | ||| ||
Sbjct 50047 CTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGACAGCGTTCTACCG 50106
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| |||| ||| || || || | ||||||| ||| || || || ||||| ||||| ||
Sbjct 50107 TCTTCCAGTTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGAATACCTTCCTTG 50166
Query 45246 TCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304
||||||| |||| | | | || | || | ||||| ||||| || || || || || |
Sbjct 50167 TCTTGAA-TTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTAT 50225
Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || || || || || || || |||||||||||
Sbjct 50226 AGTCTTACCTGTCAGTGTCTTGACGAAAATTTGCAT 50261
Score = 86.0 bits (94), Expect = 6e-12
Identities = 152/219 (69%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 45123 AGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTA 45182
||||| | ||| ||||| | || || ||||| || || || ||||| | ||| ||
Sbjct 50500 AGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTA 50559
Query 45183 GAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCT 45242
|| || | || || || || | ||||||| ||| || || || || || |||||
Sbjct 50560 CCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCC 50619
Query 45243 TTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGT 45301
|| ||||||| |||| | | | || | || | ||| |||||||| || ||||| | ||
Sbjct 50620 TTGTCTTGAA-TTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAATGT 50678
Query 45302 AACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
| ||||| ||||| | ||| || || ||||| |||||
Sbjct 50679 TATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 50717
>seq1163
Length=25514
Score = 123 bits (136), Expect = 2e-23
Identities = 157/216 (73%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
||||| || | || || || |||||||||||||| || || ||| | ||| || |
Sbjct 8664 CTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACCA 8605
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| |||||||| || || || | ||||||| ||| ||||| || ||||| ||||| ||
Sbjct 8604 TCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTG 8545
Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305
||||| || || |||| || | ||||| ||||| || ||||| || ||||
Sbjct 8544 TCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAGGGTAATA 8485
Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341
|| || ||||||| ||| || || ||||||||||||
Sbjct 8484 GTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATC 8449
>seq20
Length=83493
Score = 84.2 bits (92), Expect = 2e-11
Identities = 142/206 (69%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
||||| || | ||| | || |||||||||||||| || || || | ||| ||
Sbjct 63194 CTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAGAGTTCTACCG 63253
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| |||||||| || || || | ||||||| ||| ||||| || || || ||||| ||
Sbjct 63254 TCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTG 63313
Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305
||||| || || |||| || | |||||| ||||| || ||||| | ||| |
Sbjct 63314 TCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCCAAAGTGATG 63373
Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAA 45331
|| || || || | ||| || || ||
Sbjct 63374 GTCTTACCAGTCAAAGTCTTAACGAA 63399
>seq22
Length=73151
Score = 82.4 bits (90), Expect = 7e-11
Identities = 200/303 (66%), Gaps = 0/303 (0%)
Strand=Plus/Minus
Query 122841 TACAAATATTTTGGATACAAAACGTTAGAAAACGGATATTTGaaaaaaaTCGAGGAAAAG 122900
|||| |||||||| | ||||| || ||| ||||| || |||| | | |
Sbjct 63880 TACAGTTATTTTGGTTTTAAAACTTTGGAACGTTCTTATTTACTAAGAATCAACGGTCAA 63821
Query 122901 GTCGCCGAACGTATTCAACATATGCTCATGCGCGTCGCTATAGGCGTGCACGGACGCGAC 122960
|| ||||||||| |||||| | | ||| | ||||| ||||| | ||||| | ||
Sbjct 63820 GTGGCCGAACGTCCACAACATTTAATTATGAGAGTCGCACTAGGCATCCACGGTAGAGAT 63761
Query 122961 ATCGAAAACGCGACCGAAACTTACGATTTGATGTCTCAAAAATTTTTCACGCACGCGAGT 123020
||||| || ||||| || | |||||||||| ||||| ||| || ||||| |
Sbjct 63760 ATCGAGGCTGCTTTAGAAACGTATAACTTGATGTCTCTAAAATATTTTACTCACGCCTCT 63701
Query 123021 CCCACTTTGTTCGCCGCCGGCACGAAGTTGCCTCAGTTGTCTTCGTGTTTTTTGCTCACC 123080
|| || |||||| ||||| || ||||| |||| || ||||| ||| | ||
Sbjct 63700 CCAACGTTGTTCAATGCCGGTACTCCAAAACCTCAAATGTCCTCTTGTTTCTTGGTTGCC 63641
Query 123081 TTGCGCGAAGACAGCATCACCGGTATCTATGAAACTTTGCGCGATTGCGCGTTGATTTCC 123140
|| || ||| ||| || || || || || ||| || || || |||||||||
Sbjct 63640 ATGAAGGAGGACTCTATCGAGGGGATTTACGACACCTTGAAGGAATGTGCTTTGATTTCC 63581
Query 123141 AAA 123143
|||
Sbjct 63580 AAA 63578
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 451984453167280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |