Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178305.1_202017-04-
22] 3,318 sequences; 12,557,627 total letters
Query= NC_023426.1
Length=245717
Score E
Sequences producing significant alignments: (Bits) Value
seq2378 114 2e-20
seq12 107 3e-18
>seq2378
Length=83904
Score = 114 bits (126), Expect = 2e-20
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
||||||| ||| | || ||| | ||||| || || || || | || || ||| | |
Sbjct 50260 TGCAAATTTTCGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCTG 50201
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
| |||||| | || || || ||||| ||| || ||||| ||||| || |||||||
Sbjct 50200 ACACTATTGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCAAC 50141
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
||||| | || ||||| ||||| ||| | || || ||||||| | | |||||||| |
Sbjct 50140 AAAGATTGATCTTTGCCGGTAAGCAACTGGAAGACGGTAGAACGCTGTCTGATTATAACA 50081
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259
| || ||||| || || | ||||| || || |||| ||||| ||||
Sbjct 50080 TTCAGAAAGAGTCTACGTTGCATTTGGTGTTGAGATTGAGAGGTGGTA 50033
Score = 87.8 bits (96), Expect = 3e-12
Identities = 156/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
|||| || ||| | || || || || || ||||| || || | || || ||| | ||
Sbjct 50716 TGCAGATTTTCGTCAAGACTTTGACCGGTAAAACCATAACATTGGAAGTTGAATCTTCCG 50657
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
|||| || | || || || ||||| ||| || ||||| || || || |||||||
Sbjct 50656 ATACCATCGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATCCCTCCAGATCAAC 50597
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
||||| | || ||||| ||||| || |||| || ||||||| | | ||||| || |
Sbjct 50596 AAAGATTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACGCTGTCTGATTACAACA 50537
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259
| || || || || || | ||| | || || | ||||||| ||||
Sbjct 50536 TTCAGAAGGAGTCCACCTTACATCTTGTGCTAAGGCTAAGAGGTGGTA 50489
>seq12
Length=144441
Score = 107 bits (118), Expect = 3e-18
Identities = 152/214 (71%), Gaps = 0/214 (0%)
Strand=Plus/Plus
Query 146046 AAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACGATACTATTCAAAAT 146105
|| || || || || || || || ||| | || || ||| | || |||||| | |||
Sbjct 31956 AAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATTGACAAT 32015
Query 146106 GTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAACAAAGACTCATTTTT 146165
|| || || || ||| || ||||| || ||||| || ||||||||| | || |||
Sbjct 32016 GTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTGATCTTT 32075
Query 146166 GCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATATACAAAAAGAATCG 146225
|| ||||| ||||| || || |||||| || | || || || || |||||||||||
Sbjct 32076 GCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAAAAGAATCC 32135
Query 146226 ACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259
||| | || ||||| || |||| ||||| ||||
Sbjct 32136 ACTTTGCACTTAGTCTTGAGATTGAGAGGTGGTA 32169
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 786133793748560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |