Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178315.1_202017-04-
21] 2,667 sequences; 12,341,154 total letters
Query= NC_001623.1
Length=133894
Score E
Sequences producing significant alignments: (Bits) Value
seq11 104 2e-17
seq26 100 2e-16
>seq11
Length=232209
Score = 104 bits (114), Expect = 2e-17
Identities = 161/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 28959 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 29018
|| |||||||| ||| |||| || || || || || || |||||| ||| ||| |
Sbjct 223604 AAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTGGAAGTTGAATCT 223545
Query 29019 GCAGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 29078
| || || | | | || | ||| || || || || |||||| | || ||
Sbjct 223544 TCTGACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGAC 223485
Query 29079 CAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTAC 29138
||||||||| | |||||||| || || ||| |||||||| | |||| || |||| |||
Sbjct 223484 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTAC 223425
Query 29139 AATATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188
|| || || |||||||||||||| ||| |||| || |||| |||| ||
Sbjct 223424 AACATCCAAAAGGAATCTACTCTACACTTGGTCTTGAGATTGAGAGGTGG 223375
>seq26
Length=71848
Score = 100 bits (110), Expect = 2e-16
Identities = 108/143 (76%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 29046 AAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAA 29105
|||||| |||||||||||| | || |||||||| ||| | || ||||| || ||
Sbjct 32199 AAAATTCAAGATAAAGAAGGTATCCCTCCGGATCAACAGAGATTGATTTTTGCTGGTAAG 32258
Query 29106 CAACTGGAAGATTCCAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCAC 29165
||||| |||||| | ||| || | || ||||| || || ||||||||||||||||||
Sbjct 32259 CAACTAGAAGATGGTAGAACCTTGTCTGACTACAACATCCAAAAGGAATCTACTCTTCAC 32318
Query 29166 ATGGTGTTACGATTACGAGGAGG 29188
||||||| |||| |||| ||
Sbjct 32319 TTGGTGTTGAGATTGAGAGGTGG 32341
Score = 100 bits (110), Expect = 2e-16
Identities = 108/143 (76%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 29046 AAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAA 29105
|||||| |||||||||||| | || |||||||| ||| | || ||||| || ||
Sbjct 32655 AAAATTCAAGATAAAGAAGGTATCCCTCCGGATCAACAGAGATTGATTTTTGCTGGTAAG 32714
Query 29106 CAACTGGAAGATTCCAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCAC 29165
||||| |||||| | ||| || | || ||||| || || ||||||||||||||||||
Sbjct 32715 CAACTAGAAGATGGTAGAACCTTGTCTGACTACAACATCCAAAAGGAATCTACTCTTCAC 32774
Query 29166 ATGGTGTTACGATTACGAGGAGG 29188
||||||| |||| |||| ||
Sbjct 32775 TTGGTGTTGAGATTGAGAGGTGG 32797
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021
|||||||| || |||| ||| |||| || || || || ||| || ||| | |
Sbjct 32343 ATGCAAATTTTTGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCT 32402
Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081
|| || | | | | ||||| |||||| || || |||||| | || |||||||
Sbjct 32403 GACACTATTGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCAA 32462
Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141
|||||| | |||||||| || || ||||||||||| | ||| || | ||||| ||
Sbjct 32463 CAAAGATTGATCTTTGCCGGTAAGCAACTGGAAGACGGTAGAACGCTGTCTGATTATAAC 32522
Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188
|||||||| || ||||| | || ||||||| |||| |||| ||
Sbjct 32523 ATTCAGAAAGAGTCTACGTTGCATTTGGTGTTGAGATTGAGAGGTGG 32569
Score = 89.7 bits (98), Expect = 4e-13
Identities = 138/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021
||||| || ||| |||| || ||||| || |||||||| || ||| ||| | |
Sbjct 31431 ATGCAGATTTTCGTCAAGACTTTGACCGGTAAAACCATAACATTGGAAGTTGAATCTTCC 31490
Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081
|| || | | | | ||||| |||||| || || |||||| | || |||||||
Sbjct 31491 GATACCATCGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATCCCTCCAGATCAA 31550
Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141
|||||| | |||||||| || || || || ||||| | ||| || | ||||||||
Sbjct 31551 CAAAGATTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACGCTGTCTGATTACAAC 31610
Query 29142 ATTCAGAAGGAATCTAC 29158
||||||||||| || ||
Sbjct 31611 ATTCAGAAGGAGTCCAC 31627
Score = 89.7 bits (98), Expect = 4e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021
||||| || || | || || ||||| || |||||||| || || ||| || |
Sbjct 31659 ATGCAGATCTTTGTTAAGACTTTGACCGGTAAAACCATCACTTTAGAGGTCGAATCCTCC 31718
Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081
|| ||| | | | ||||| ||||| || || |||||| | || |||||||
Sbjct 31719 GACACGATCGATAACGTTAAGTCGAAAATCCAGGACAAGGAAGGTATCCCTCCAGATCAA 31778
Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141
|| || | |||||||| || || || || ||||| | ||| || | || |||||
Sbjct 31779 CAGAGGTTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACCTTGTCTGACTACAAC 31838
Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188
|| || |||||||||||||||||| ||||||| |||| |||| ||
Sbjct 31839 ATCCAAAAGGAATCTACTCTTCACTTGGTGTTGAGATTGAGAGGTGG 31885
Score = 86.0 bits (94), Expect = 5e-12
Identities = 146/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021
|||||||| || |||| ||| |||| || || || || ||| || ||| | |
Sbjct 32799 ATGCAAATTTTTGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCT 32858
Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081
|| || | | | | ||||| |||||| || || |||||| | || ||| ||
Sbjct 32859 GACACTATTGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATTCCTCCAGACCAG 32918
Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141
|||||| | || ||||| || || ||||| |||||| | ||| || | || ||||||
Sbjct 32919 CAAAGATTGATTTTTGCCGGTAAGCAACTAGAAGATGGTAGAACGCTGTCGGACTACAAT 32978
Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTT 29173
||||| ||||| || ||||||||| | || ||
Sbjct 32979 ATTCAAAAGGAGTCCACTCTTCACCTTGTCTT 33010
Score = 82.4 bits (90), Expect = 7e-11
Identities = 104/143 (73%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 29046 AAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAA 29105
|||||| || || |||||| | || ||||||||||||| | || ||||| || ||
Sbjct 31971 AAAATTCAAGACAAGGAAGGTATTCCTCCAGATCAACAAAGATTGATTTTTGCCGGTAAG 32030
Query 29106 CAACTGGAAGATTCCAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCAC 29165
||||||||||| | ||| || | ||||| || |||||||| || ||||| | ||
Sbjct 32031 CAACTGGAAGACGGTAGAACGCTGTCTGATTATAACATTCAGAAAGAGTCTACGTTGCAT 32090
Query 29166 ATGGTGTTACGATTACGAGGAGG 29188
||||||| |||| |||| ||
Sbjct 32091 TTGGTGTTGAGATTGAGAGGTGG 32113
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 428322077339885
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |