Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178315.1_202017-04- 21] 2,667 sequences; 12,341,154 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq4 129 7e-25 >seq4 Length=380639 Score = 129 bits (142), Expect = 7e-25 Identities = 484/746 (65%), Gaps = 30/746 (4%) Strand=Plus/Minus Query 92790 CATAACACCACATTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTC 92849 |||||||||| |||||||| || |||| | ||||| ||||| || ||||| || | Sbjct 244036 CATAACACCAGCCTTTTGGTAGTCAGAAACTCTCTTTTCGAAGAAGTTAGTCTTACCGGC 243977 Query 92850 CAAAGATATCGAATTCACT---AGTGATTGGATTCTTGGCGTTATAATA---CTTTTCAC 92903 ||| || || | ||| | | || || || | | | || || || ||| | || Sbjct 243976 CAAGGAGAT-GTTTTCCATGAAATCGAAGGGGTTTTCGACCTTGTAGTATTTCTTGTTAC 243918 Query 92904 CGATCAACTCGTACAATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCAC 92963 ||| | || ||| | ||| || || || || || | ||| || ||| || ||| Sbjct 243917 CGA---AAGCGACCAACAGTCTGTCGGCGACGAACTCAACGTATTGGTTCATTAAGTCAG 243861 Query 92964 AATTCATTCCTAGAAGACGTACAGGTAGAGCGTCGGTCAAGAA--ATCTTTCT-CGATTA 93020 ||||| ||||| | | || |||| ||||| |||||| |||||| | | ||| Sbjct 243860 CGTTCATACCTAGCAAAGCAACTGGTAAGGCGTC---CAAGAAGTATCTTTGTTCAATTT 243804 Query 93021 CAACGGCTTCTTTCAAGATTTCTATTACTCTACTATT--TGG---TGGTTT-TTGTACGA 93074 | || || || | | |||| | || || || ||| |||||| || | | | Sbjct 243803 CCACAGCCTCGGTGACAATTTTT-----TCAACGATGGCTGGGTCTGGTTTGTTCTTCAA 243749 Query 93075 CATAATTGTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACT 93134 || | ||| ||||| ||||||||||| || ||||||||||||| | ||||| | Sbjct 243748 -ATGGGCGAACAACAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATT 243690 Query 93135 CATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAA 93194 | ||| || |||||||| || | || |||| || || | ||| || || || |||| Sbjct 243689 CGTTGGAAAAGGTTAAACCGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAA 243630 Query 93195 AACTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAAT 93254 | ||| || ||||| | |||||| | || ||||| || || | | ||| |||| Sbjct 243629 AGGAACCGGAGAAAAAGACACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCAAACA 243570 Query 93255 TTGCGGAATTACTGCTG-ATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGT 93313 ||| | | || |||||| |||||||||| ||||| || | || || Sbjct 243569 AGGCGTCA-GCGTCTTGAATCCATCTTAAAGCCCATTCGGCCTTCTCACCGATTTCTGGG 243511 Query 93314 AGTGTTTCGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCG 93373 | || | || || || || | | | || | || | | || ||||| |||||| Sbjct 243510 ATGGTGTGAATGGCATTGAACAAGAATTCACTTTCTTTAGGGTCCTTGATGTAAGTATCG 243451 Query 93374 ATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAA 93433 || |||| || || ||||||| || | ||| || || |||||||| ||||||||| Sbjct 243450 ATCAACAAGGAGTAAGTTTCAGAGTGAATATTTTCAATCATGATTTGGAAACCGTAGAAA 243391 Query 93434 CATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACT 93493 | | || || | || || ||||| || || | || || | |||||||| || Sbjct 243390 CTCTTTGCCTCTGGAATTTGGACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACA 243331 Query 93494 ATACCATCGGATGCTGCaaaaaaaGC 93519 ||||| || || || || ||||| || Sbjct 243330 ATACCGTCAGAAGCGGCGAAAAAGGC 243305 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556842235653080