Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178325.1_202017-04-
21] 638 sequences; 11,765,677 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq27 116 4e-21
>seq27
Length=78598
Score = 116 bits (128), Expect = 4e-21
Identities = 164/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| | |||| |||||||||||| | |||||||||||| ||||| || ||||| |
Sbjct 50964 CCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGAC 51023
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| ||| | | || || || || || || || ||||||||| || ||||| |||||
Sbjct 51024 AGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGA 51083
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065
|| || |||||||| |||||| ||| | |||| || | ||||| | | || ||
Sbjct 51084 ATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTG-TCAATAGTGTCAGAAGATTCAAC 51142
Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| | ||| | || || || ||||| || || |||||||| |||||
Sbjct 51143 CTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 51190
Score = 113 bits (124), Expect = 4e-20
Identities = 153/211 (73%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 126904 CACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTC 126963
||| | ||||| || ||||| || ||||| |||||||| || ||| | | || ||
Sbjct 51437 CACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACCGTCTTC 51496
Query 126964 TAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGT 127023
|||||| || || || ||||||||| || ||||| ||||| || || ||||||||
Sbjct 51497 TAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTCTTG 51556
Query 127024 GATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTT 127082
|||||| ||| | ||||| ||| ||| || | | || ||||| | || | ||||
Sbjct 51557 AATTTTCGACTTAACGTTGT-CGATGGTATCGGAAGATTCAACTTCCAATGTTATGGTTT 51615
Query 127083 TGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
| ||||||| ||| || || |||||||||||
Sbjct 51616 TACCGGTCAAAGTCTTGACGAAAATCTGCAT 51646
Score = 96.9 bits (106), Expect = 3e-15
Identities = 144/199 (72%), Gaps = 4/199 (2%)
Strand=Plus/Plus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|| ||||| |||||||||||||| || || ||| | | ||| ||||| ||||| ||
Sbjct 50538 GTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCATCTTCTAGTTGTTTACCG 50597
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTG-CTT 127035
|| ||||||||| ||||| || ||||| || || ||||||| | ||| ||| || |||
Sbjct 50598 GCAAAGATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGT-CTTGAATTTTTGACTT 50656
Query 127036 GA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAG 127094
| |||| || | ||||| | | || || || | ||| | || || || ||||| |
Sbjct 50657 AACGTTG-TCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATAGTCTTACCTGTCAGTG 50715
Query 127095 TTTTTACAAAAATCTGCAT 127113
| || || ||||| |||||
Sbjct 50716 TCTTGACGAAAATTTGCAT 50734
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475497007881120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |