Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178325.1_202017-04- 21] 638 sequences; 11,765,677 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq27 116 4e-21 >seq27 Length=78598 Score = 116 bits (128), Expect = 4e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| | |||| |||||||||||| | |||||||||||| ||||| || ||||| | Sbjct 50964 CCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGAC 51023 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||| | | || || || || || || || ||||||||| || ||||| ||||| Sbjct 51024 AGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGA 51083 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || || |||||||| |||||| ||| | |||| || | ||||| | | || || Sbjct 51084 ATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTG-TCAATAGTGTCAGAAGATTCAAC 51142 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | ||| | || || || ||||| || || |||||||| ||||| Sbjct 51143 CTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 51190 Score = 113 bits (124), Expect = 4e-20 Identities = 153/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 126904 CACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTC 126963 ||| | ||||| || ||||| || ||||| |||||||| || ||| | | || || Sbjct 51437 CACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACCGTCTTC 51496 Query 126964 TAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGT 127023 |||||| || || || ||||||||| || ||||| ||||| || || |||||||| Sbjct 51497 TAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTCTTG 51556 Query 127024 GATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTT 127082 |||||| ||| | ||||| ||| ||| || | | || ||||| | || | |||| Sbjct 51557 AATTTTCGACTTAACGTTGT-CGATGGTATCGGAAGATTCAACTTCCAATGTTATGGTTT 51615 Query 127083 TGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 | ||||||| ||| || || ||||||||||| Sbjct 51616 TACCGGTCAAAGTCTTGACGAAAATCTGCAT 51646 Score = 96.9 bits (106), Expect = 3e-15 Identities = 144/199 (72%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| |||||||||||||| || || ||| | | ||| ||||| ||||| || Sbjct 50538 GTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCATCTTCTAGTTGTTTACCG 50597 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTG-CTT 127035 || ||||||||| ||||| || ||||| || || ||||||| | ||| ||| || ||| Sbjct 50598 GCAAAGATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGT-CTTGAATTTTTGACTT 50656 Query 127036 GA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAG 127094 | |||| || | ||||| | | || || || | ||| | || || || ||||| | Sbjct 50657 AACGTTG-TCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATAGTCTTACCTGTCAGTG 50715 Query 127095 TTTTTACAAAAATCTGCAT 127113 | || || ||||| ||||| Sbjct 50716 TCTTGACGAAAATTTGCAT 50734 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475497007881120