Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178325.1_202017-04- 21] 638 sequences; 11,765,677 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq27 149 6e-31 seq590 105 6e-18 seq26 105 6e-18 >seq27 Length=78598 Score = 149 bits (164), Expect = 6e-31 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||| | || ||||||||||| || | ||| |||||||| |||||||| || | | Sbjct 51192 CCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAC 51251 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 ||||||| |||| || ||||||||||| ||||| ||||||| ||| || || | ||| Sbjct 51252 AAGGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGGG 51311 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | ||||||||| ||| || ||| | | | | ||||||| ||||| ||| Sbjct 51312 ATACCTTCCTTGTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACC 51371 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || | ||||| |||||||| |||||||| || ||||| |||||||| Sbjct 51372 TCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 51418 Score = 116 bits (128), Expect = 3e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||| | || |||||||||||||| |||||| ||| || |||||||| ||||| | | Sbjct 50964 CCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGAC 51023 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | |||| |||| ||||| |||||||| ||||| ||||| | || || || | |||| Sbjct 51024 AGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGA 51083 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688 | | ||||||| | ||| ||| | | | |||| | | ||||| ||||| || Sbjct 51084 ATACCTTCCTTGT-CTTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAAC 51142 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||| | || || || ||||| |||| || || ||||| || ||||| Sbjct 51143 CTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 51190 Score = 116 bits (128), Expect = 3e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||| | || ||| | ||| | |||||| || |||||| |||||||||||||| | | Sbjct 51420 CCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGAC 51479 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | |||| |||| || ||||||||||| ||||| ||||| | || || || | ||| Sbjct 51480 AGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGG 51539 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688 | | ||||||| | ||| ||| | | | |||| | | || ||| ||||| || Sbjct 51540 ATACCTTCCTTGT-CTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAAC 51598 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 |||| || || |||||||| |||||||| || || || |||||||| Sbjct 51599 TTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 51646 Score = 89.7 bits (98), Expect = 5e-13 Identities = 160/231 (69%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 35507 TTTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCG 35566 || ||||| | |||||||| || | || | || |||||||||||| ||||| || Sbjct 50505 TTACCACCCCTCAACCTCAAGACGAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCC 50564 Query 35567 GCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAA 35626 | || |||| | || || || || ||||| ||||| ||||| | |||||||| | | Sbjct 50565 GACAGCGTTCTACCATCTTCTAGTTGTTTACCGGCAAAGATCAATCTTTGCTGGTCTGGA 50624 Query 35627 GGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTC 35685 |||| | ||||||| | ||| ||||| | | |||| | | ||||| ||||| Sbjct 50625 GGAATACCTTCCTTGT-CTTGAATTTTTGACTTAACGTTGTCAATAGTGTCAGAAGATTC 50683 Query 35686 CACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||||| | || || || ||||| |||| || || || || || ||||| Sbjct 50684 AACCTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACGAAAATTTGCAT 50734 >seq590 Length=403560 Score = 105 bits (116), Expect = 6e-18 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||| | || ||||| || || || || || || |||||||||||||| || | | Sbjct 44155 CCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGAC 44096 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 ||||||| |||| |||| |||||||| ||||| ||||| | || ||||| | || Sbjct 44095 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 44036 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | |||||||| |||||| ||| | | | | | ||||| ||||| || Sbjct 44035 ATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 43976 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAA 35727 |||| ||||| || ||||| |||||||| || ||||| Sbjct 43975 TCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAA 43938 >seq26 Length=91958 Score = 105 bits (116), Expect = 6e-18 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||| | ||| ||||| ||||||||||| || |||||||| |||||||| || | Sbjct 62060 CCACCTCTTAATCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGAT 62119 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | |||| |||| |||| |||||||| ||||| ||||| | || ||||| | || Sbjct 62120 AGAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 62179 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | |||||||| |||||| ||| | | | | | ||||| ||||| || Sbjct 62180 ATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACT 62239 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAA 35727 |||| ||||| || ||||| |||||||| || || || Sbjct 62240 TCCAAAGTGATGGTCTTACCAGTCAAAGTCTTAACGAA 62277 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450790004921040