Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178335.1_202017-04- 21] 772 sequences; 11,804,229 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq3 91.5 2e-13 seq674 89.7 8e-13 >seq3 Length=347946 Score = 91.5 bits (100), Expect = 2e-13 Identities = 160/225 (71%), Gaps = 6/225 (3%) Strand=Plus/Plus Query 70033 TTTGGATTCGCTCGGCTTCACCGACAGACAAGAGGGCGATCTGGGGCCAGTGTACGGATT 70092 ||| ||| | | || |||| || || ||| || ||||||||||| || |||||||| Sbjct 108293 TTTAGATAAGATGGGGTTCAAAGATAGGAAAGTAGGAGATCTGGGGCCCGTTTACGGATT 108352 Query 70093 CCAGTGGAGGCACTCGGGCACCAAGTATGTAGAC-TGCGA-GACAGACTATTCGGGTCAG 70150 || |||||||| | || | || || |||| ||||| ||| |||||| | || || Sbjct 108353 TCAATGGAGGCATTTTGGTGCTAAATACA-AGACGTGCGATGAC-GACTATACTGGACAA 108410 Query 70151 GGTGTTGATCAATTGCAGACA-ATCATTGACACTCTCAAGACCAATCCAACAGATAGGAG 70209 ||| ||||||||||| | ||| | ||| | | || ||||| ||||| ||||| || Sbjct 108411 GGTATTGATCAATTG-AAACAGGTTATTCATAAACTAAAGACAAATCCCTACGATAGAAG 108469 Query 70210 GATCGTAATGTGCTCATGGAATCCTGCAGATTTGCACCAAATGGC 70254 ||| | ||| | | ||||| || || ||||| || ||||||| Sbjct 108470 AATCATTATGAGTGCCTGGAACCCAGCTGATTTTGACAAAATGGC 108514 >seq674 Length=339435 Score = 89.7 bits (98), Expect = 8e-13 Identities = 310/475 (65%), Gaps = 13/475 (3%) Strand=Plus/Minus Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935 ||||| || |||||| | || || || | ||| | ||| ||||||| ||||| || || Sbjct 63121 CAGGGTGGTAATAAAAGACCTGGTGCGTTTGCCCTTTACCTGGAACCATGGCATGCTGAT 63062 Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCA---CGAGCCAGG 96992 | ||||| ||||| || || | || ||| || | |||||| | || || || Sbjct 63061 ATCTTTGATTTTATTGATATTAGGAAGAACCACGG---TAAAGAGGAAATTCGTGCAAGA 63005 Query 96993 GACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGACGGTGGC 97052 || ||||| ||| || ||| | || ||| | ||||||||||| ||| | || ||| Sbjct 63004 GATTTGTTCCCTGCTCTATGGATTCCTGATCTTTTCATGAAGCGTGTCGAAGAAAATGGG 62945 Query 97053 TACTGGAGCCTAATGTGCCCCGAC-TCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGA 97111 ||||| | | || | || || || | || ||| | |||||| | || || || Sbjct 62944 ACCTGGA-CATTATTCTCTCCAACATCAGCTCCTGGTTTAAGCGATTGTTACGGTGACGA 62886 Query 97112 GTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCGATACGTGAGACGAGTCGATGC 97171 ||||||||| || || ||||||| |||| || || || |||| | || | || Sbjct 62885 GTTTGAGGCTCTATATACCCGCTACGAGAAAGAAGGTCG--TGGTAAGACTA-TCAAAGC 62829 Query 97172 ACGAGAACTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCT 97231 | | || | ||| | |||| || ||||| || ||||| || || | | || | Sbjct 62828 CCAAAAATTATGGTATTCCATTTTGGAAGCTCAAACTGAAACTGGTACACCTTTCGTTGT 62769 Query 97232 CTACAAGGATACCGTGAATCGCAACAGC-AACCAACGCCACTTGGGCACCATCAAGGGCT 97290 ||||||||| | || | | || | | || ||| |||| || ||||||| | Sbjct 62768 TTACAAGGAT-GCTTGTAACAGAAAATCTAATCAAAAAAACTTAGGTGTCATCAAGTCAT 62710 Query 97291 CCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTTG 97345 | || | ||| |||||||| || ||| | |||| || || || || ||||| Sbjct 62709 CAAACTTATGCTGTGAAATTGTTGAATACTCAGCTCCAGATGAAACTGCTGTTTG 62655 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741052048778720