Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178335.1_202017-04-
21] 772 sequences; 11,804,229 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq20 104 2e-17
seq193 95.1 1e-14
seq8 82.4 8e-11
>seq20
Length=76938
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| |||| ||| | ||| || || || | | || |||||||| ||||||||||| |
Sbjct 31937 CCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAC 31878
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| || | ||| || || || ||||||| | |||| | | |||||| || |||||
Sbjct 31877 AAGGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGGG 31818
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567
|||||||| ||||| |||||| || | | || | ||||||| || || |||
Sbjct 31817 ATACCTTCCTTGTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACC 31758
Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|| | || | |||||||| |||| ||| || ||||| ||||||||
Sbjct 31757 TCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 31711
Score = 100 bits (110), Expect = 3e-16
Identities = 148/206 (72%), Gaps = 4/206 (2%)
Strand=Plus/Minus
Query 138411 ATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTG 138470
||||| | | |||||||| ||||||||||| || || || | ||| || || ||
Sbjct 31686 ATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACCGTCTTCTAGCTG 31627
Query 138471 TTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTT 138530
||||||| | |||| | | ||||| || ||||| |||||||| ||||| ||| |||
Sbjct 31626 CTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTCT-TGAATTT 31568
Query 138531 TTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCA 138588
| | |||| |||| | | ||| |||| || || || || | || | ||||||||
Sbjct 31567 TCGACTTAACGTTGT-CGATGGTATCGGAAGATTCAACTTCCAATGTTATGGTTTTACCG 31509
Query 138589 GTCAGAGTTTTTACAAAAATCTGCAT 138614
|||| ||| || || |||||||||||
Sbjct 31508 GTCAAAGTCTTGACGAAAATCTGCAT 31483
Score = 100 bits (110), Expect = 3e-16
Identities = 142/196 (72%), Gaps = 4/196 (2%)
Strand=Plus/Minus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|||||||||||||| |||||||| || || | || || ||||||||||||| |
Sbjct 32588 GACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCATCTTCTAGTTGTTTACCGGCA 32529
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA- 138539
|||| | | || ||||| ||||| |||||||| ||||| ||| |||||| ||||
Sbjct 32528 AAGATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGTC-TTGAATTTTTGACTTAAC 32470
Query 138540 -TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598
||| || | ||||| | || || ||||| | || | || ||||| ||||| || |
Sbjct 32469 GTTG-TCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATAGTCTTACCTGTCAGTGTCT 32411
Query 138599 TTACAAAAATCTGCAT 138614
| || ||||| |||||
Sbjct 32410 TGACGAAAATTTGCAT 32395
Score = 93.3 bits (102), Expect = 4e-14
Identities = 160/229 (70%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| |||| ||| | ||| || | || | | || |||||||| ||||||||||| |
Sbjct 32393 CCACCTCTCAATCTCAACACCAGGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAC 32334
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| || | || || ||||| ||||| | | | || | | |||||| ||||||||
Sbjct 32333 AAGGTTCTACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGG 32274
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCA 138565
||||||||||| || ||| |||| |||| | ||| || | ||||||| || || |
Sbjct 32273 ATACCTTCTTTATC-TTGAATTTTACTTTTGACGTTG-TCAATAGTGTCGGAAGATTCAA 32216
Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|||| | || | || || || || |||||||| || ||||| |||||
Sbjct 32215 CCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 32167
>seq193
Length=188703
Score = 95.1 bits (104), Expect = 1e-14
Identities = 312/482 (65%), Gaps = 10/482 (2%)
Strand=Plus/Plus
Query 153087 GGTTCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGTGGTTGCGGTCGGCATGTACGCC 153146
||||||||| |||| |||| || || ||||| | || | ||||| ||||| |||
Sbjct 36576 GGTTCAAAGCATTCATTATAACCAAGAATTTGGGAAGTTGAGGCGGTTGGCATTGGTGCC 36635
Query 153147 ACCAACAAAGAATTCCGCAAGCCGTGCGCTCGAATGTCGTCCTTCAACGCCTGCCAATCC 153206
| |||||| || | || || || |||||| | | || | | |||||||
Sbjct 36636 ATAGTCAAAGAGTTTCTTAACCCATGTTTAACAATGTCCTTTCTTAAGGTTTCCCAATCC 36695
Query 153207 CACAGCGCCGACGGTGTCGCGTTCCACATGTCGTACTGTAACACTCCTCGACTGGCGGGA 153266
|||| | | ||| | ||||||||||| ||| | ||||| | || | || |||
Sbjct 36696 CACATGCCAAATGGTTTAGCGTTCCACATATCGAATTGTAAAATACCCTTAGAAGCTGGA 36755
Query 153267 CTGCCGGCAAACGTACTGTAGCTGCCGTCGCGTTGGGCCAGTTCGCAGCTAGCCTCGAGC 153326
|| |||| ||| || | || || |||||||| ||| ||| || || ||
Sbjct 36756 GAACCTTCAAAAGTAGAATATTTACCTTCTTTTTGGGCCAATTCACAGGAGGCTTCAAGA 36815
Query 153327 GCGCCATAGTATATGGTTTCGGCGATTTGTTTATTGAGAACGGCCGCTTCTTCGCTCTCG 153386
| ||| ||| || |||||| ||||||||| || ||| |||||||| ||
Sbjct 36816 GTAGCATGGTAAATAGTTTCGAAGATTTGTTTGTTTAGAGTTTGAGCTTCTTCCGATTCA 36875
Query 153387 TACGGCATGCGCAGCAGCACAAAGGCGTCGGCCAGACCCTGGATACCGACGCCGATGGGT 153446
| || | |||| || || | | | ||||||| |||||||| ||| | | || |||
Sbjct 36876 AAGGGTAGACGCAACATCATATAAGTATCGGCCAAACCCTGGACACCAAGAGCAATAGGT 36935
Query 153447 CGATGCTTC-TCGTTG--CTGC--GCCTCGCGCTCGCTATGGGATAGTGATTGCGATCGA 153501
| ||||||| | ||| | | |||||| | | ||||||| ||| || ||||
Sbjct 36936 CTATGCTTCATATTTGAATTTCTAGCCTCG-----GGAACTGGATAGTAATTACGGTCGA 36990
Query 153502 TAATTTTGTTGAGGTTGCGCACCACCACTTTAGTTATCGCCTTAAGTTTCTCGAAATCAT 153561
||| | |||| | |||| | | ||||||| ||| | | | | ||||||||| ||
Sbjct 36991 TAACTCTGTTCAAGTTGTGAGTAATGACTTTAGCAATCTCGTGTAATCTCTCGAAATTAT 37050
Query 153562 AG 153563
||
Sbjct 37051 AG 37052
>seq8
Length=175921
Score = 82.4 bits (90), Expect = 8e-11
Identities = 153/221 (69%), Gaps = 4/221 (2%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| |||| ||| | ||| ||||| || | | || || ||||||||||||||||| |
Sbjct 127923 CCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGAC 127982
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| || | ||| || | ||| ||||| | | |||| | | |||||||| || ||
Sbjct 127983 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 128042
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG--TTTTAATTGTTCCACGGTGTCGGTCGACTCCA 138565
|||||||| ||||| ||| | |||| || |||| || | ||||| | || || |
Sbjct 128043 ATACCTTCCTTGTC-TTGAATCTTTGACTTGACATTG-TCAATAGTGTCAGAAGATTCAA 128100
Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAA 138606
| || | || | || |||||||||| ||| || ||||||
Sbjct 128101 CTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAAA 128141
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496257611067840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |