Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178335.1_202017-04-
21] 772 sequences; 11,804,229 total letters
Query= NC_021247.1
Length=228750
Score E
Sequences producing significant alignments: (Bits) Value
seq20 154 2e-32
seq612 120 4e-22
seq18 111 2e-19
seq8 107 3e-18
>seq20
Length=76938
Score = 154 bits (170), Expect = 2e-32
Identities = 171/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| ||| | || ||| |||| || || ||||| || |||| || ||| ||||
Sbjct 31939 ATGCAAATTTTTGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCT 31998
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | ||| ||||| || ||||| ||||| || ||||| || |||||||| |||
Sbjct 31999 GACACTATCGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCAA 32058
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
||||||||||| | |||||||||||| || ||||| ||||| | || ||||||||
Sbjct 32059 CAAAGATTGATCTTTGCCGGTAAGCAACTGGAAGACGGTAGAACGCTGTCTGATTATAAC 32118
Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
|| |||||| | ||| | ||||| ||||| ||||| ||||| |||
Sbjct 32119 ATTCAGAAAGAGTCTACGTTGCATTTGGTGTTGAGATTGAGAGGTGGT 32166
Score = 149 bits (164), Expect = 9e-31
Identities = 172/230 (75%), Gaps = 4/230 (2%)
Strand=Plus/Plus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| || | ||||| | || || || ||||| || |||| || ||| |||
Sbjct 32167 ATGCAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCC 32226
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | |||| ||||| |||| |||||| |||||||||||||| || ||||| || |||
Sbjct 32227 GACACTATTGACAACGTCAAAAGTAAAATTCAAGATAAAGAAGGTATCCCTCCGGATCAA 32286
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
|| |||||||||| ||| |||||||| || |||||| ||||| || || || || |
Sbjct 32287 CAGAGATTGATTTTTGCTGGTAAGCAACTAGAAGATGGTAGAACCTTGTCTGACTACA-- 32344
Query 156003 ATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
| ||||||| || | || ||||| | ||||| ||||| ||||| |||
Sbjct 32345 ACATCCAAAAGGAATCTACTCTTCACCTGGTGTTGAGATTGAGAGGTGGT 32394
Score = 134 bits (148), Expect = 2e-26
Identities = 176/243 (72%), Gaps = 2/243 (1%)
Strand=Plus/Plus
Query 155810 TTTATGTAATAAA--ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTA 155867
|||| ||||| | ||||| || || | || || ||||| || ||||| || |||||
Sbjct 31468 TTTAACTAATAGATTATGCAGATTTTCGTCAAGACTTTGACCGGTAAAACCATAACATTG 31527
Query 155868 GAAGTCGAAGATTCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGC 155927
||||| ||| ||| |||| || ||||| || ||||| ||||| || |||||
Sbjct 31528 GAAGTTGAATCTTCCGATACCATCGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGT 31587
Query 155928 ATACCTCCAGAACAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACT 155987
|| |||||||| |||||||||||||| | ||||||||||||||| ||||| |||||
Sbjct 31588 ATCCCTCCAGATCAACAAAGATTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACG 31647
Query 155988 TTATCAGATTATAATATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGC 156047
| || ||||| || || || ||| | || | ||| | ||| |||| |||||||
Sbjct 31648 CTGTCTGATTACAACATTCAGAAGGAGTCCACCTTACATCTTGTGCTAAGGCTAAGAGGT 31707
Query 156048 GGT 156050
|||
Sbjct 31708 GGT 31710
Score = 127 bits (140), Expect = 3e-24
Identities = 167/229 (73%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| || | || ||| |||| || || ||||| || |||| || ||| ||||
Sbjct 32395 ATGCAAATTTTCGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCT 32454
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | |||| ||||| || ||||| ||||| || ||||| || |||||||| ||
Sbjct 32455 GACACTATTGACAACGTTAAGTCAAAAATTCAAGACAAGGAAGGTATTCCTCCAGACCAG 32514
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
||||||||||| | ||||||||| || || |||||| ||||| | || || || |||
Sbjct 32515 CAAAGATTGATCTTTGCCGGTAAACAACTAGAAGATGGTAGAACGCTGTCGGACTACAAT 32574
Query 156003 ATATCCAAA-GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
|| || ||| ||| | || ||||| | || || || || || || |||
Sbjct 32575 AT-TCAAAAGGAGTCCACTCTTCACCTCGTCTTGAGGTTGAGGGGTGGT 32622
Score = 125 bits (138), Expect = 1e-23
Identities = 167/230 (73%), Gaps = 4/230 (2%)
Strand=Plus/Plus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
||||| || ||| |||| || ||||| || ||||| || || ||||| || ||| ||
Sbjct 31711 ATGCAGATCTTTGTTAAGACTTTGACCGGTAAAACCATCACTTTAGAGGTTGAATCCTCC 31770
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | || ||||| || ||||| || || || ||||| || |||||||| |||
Sbjct 31771 GACACGATCGATAACGTTAAGTCGAAAATCCAGGACAAGGAAGGTATCCCTCCAGATCAA 31830
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
|| || ||||| | ||||||||||||||| ||||| ||||| || || || || |
Sbjct 31831 CAGAGGTTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACCTTGTCTGACTACA-- 31888
Query 156003 ATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
| ||||||| || | || ||||| || ||||| ||||| ||||| |||
Sbjct 31889 ACATCCAAAAGGAATCTACTCTTCACTTGGTGTTGAGATTGAGAGGTGGT 31938
>seq612
Length=186347
Score = 120 bits (132), Expect = 4e-22
Identities = 168/234 (72%), Gaps = 4/234 (2%)
Strand=Plus/Minus
Query 155820 AAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGAT 155879
|| |||||||| || | || || || || || || |||||||| | ||||| ||| |
Sbjct 177862 AAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTGGAAGTTGAATCT 177803
Query 155880 TCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAA 155939
||||| | |||| || || || || || ||||| || ||||| || || || ||
Sbjct 177802 TCTGACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGAC 177743
Query 155940 CAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTAT 155999
|||||||||||||| | ||| |||||||| | |||||| |||||||| || || ||
Sbjct 177742 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTAC 177683
Query 156000 AATATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGTG 156051
| | ||||||| || | || || || || || || ||||| ||||| ||||
Sbjct 177682 A--ACATCCAAAAGGAATCTACTCTACACTTGGTCTTGAGATTGAGAGGTGGTG 177631
>seq18
Length=102523
Score = 111 bits (122), Expect = 2e-19
Identities = 156/217 (72%), Gaps = 4/217 (2%)
Strand=Plus/Minus
Query 155836 TTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCTGATAATATTTTAA 155895
|||| || |||||||| || || || || || ||||| ||| |||||| | ||| |
Sbjct 62284 TTAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACCATTGACA 62225
Query 155896 ACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAACAAAGATTGATTT 155955
| || || || || ||||| || ||||| || || || || |||||||||||||| |
Sbjct 62224 ATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTGATCT 62165
Query 155956 ATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAATATATCCAAA--GA 156013
||| |||||||| | ||||| |||||| |||| || || || || ||||| ||
Sbjct 62164 TTGCTGGTAAGCAATTGGAAGACGGTAGAACTCTATCTGACTACAACAT--CCAAAAGGA 62107
Query 156014 GGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
| || | ||||| || || ||||||||||| |||
Sbjct 62106 ATCCACTTTACATTTGGTCTTGAGATTAAGAGGTGGT 62070
>seq8
Length=175921
Score = 107 bits (118), Expect = 3e-18
Identities = 155/219 (71%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 155832 TTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCTGATAATATT 155891
||| | || || |||||||| || || || || || ||||| ||| |||||| | ||||
Sbjct 128140 TTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATT 128081
Query 155892 TTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAACAAAGATTG 155951
|| || || || || ||||| || ||||| || || || || ||||||||||||
Sbjct 128080 GACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTG 128021
Query 155952 ATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAATATATCCAAA 156011
|| | ||| |||||||| | ||||| ||||| || || || || || || |||
Sbjct 128020 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAAAA 127961
Query 156012 GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
|| | || | || ||||| || ||||| ||||| |||
Sbjct 127960 GAATCCACTTTGCACTTAGTCTTGAGATTGAGAGGTGGT 127922
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 731864937435200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |