Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178335.1_202017-04-
21] 772 sequences; 11,804,229 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq674 178 4e-39
seq193 147 6e-30
seq2 131 5e-25
seq1 102 2e-16
seq574 86.0 2e-11
>seq674
Length=339435
Score = 178 bits (196), Expect = 4e-39
Identities = 481/732 (66%), Gaps = 12/732 (2%)
Strand=Plus/Plus
Query 155630 GTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTT 155689
|||||| ||||| |||||||| | ||| || ||||||| ||||| || || || ||
Sbjct 62681 GTATTCAACAATTTCACAGCATAAGTTTGATGACTTGATGACACCTAAGTTTTTTTGATT 62740
Query 155690 AGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGC 155749
|||||| |||||||||||||||||||| | || | | || || || || || | || ||
Sbjct 62741 AGATTTTCTGTTACAAGCATCCTTGTAAACAACGAAAGGTGTACCAGTTTCAGTTTGAGC 62800
Query 155750 GTCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTG--CCTTCC 155807
|||| ||| ||| | | |||| |||| | || || | |||||
Sbjct 62801 TTCCAAAATGGAATACCATAATTTTTGGGC-----TTTGATAGTCTTACCACGACCTTCT 62855
Query 155808 GACTCATATTTCATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGG- 155866
||| || |||| || | | || |||||||||||||| || | |||||
Sbjct 62856 TTCTCGTAGCGGGTATATAGAGCCTCAAACTCGTCACCGTAACAATCGCTTAAACCAGGA 62915
Query 155867 GCACTTATCGGGGCAAAACAGCGACCAAATTTTATTACCGATTACACGCTCCATAAATAC 155926
|| | | || | | || | | ||| | ||| | ||||||| ||| || |
Sbjct 62916 GCTGATGTTGGAG-AGAATAATGTCCAGGTCCCATTTTCTTCGACACGCTTCATGAAAAG 62974
Query 155927 ATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATT 155986
|||| ||| | |||| ||| | || ||||| ||||| | ||||| ||
Sbjct 62975 ATCAGGAATCCATAGAGCAGGGAACAAATCTCTTGCACGAATTTCCTCTTTACCGTGGTT 63034
Query 155987 CTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAA 156046
||||| | || | || || ||||||| ||| ||| ||||| || | |||||
Sbjct 63035 CTTCCTAATATCAATAAAATCAAAGATATCAGCATGCCATGGTTCCAGGTAAAGGGCAAA 63094
Query 156047 ACTACCATTCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACC 156103
|||| || || |||||||| || ||||| || || || |||||||| ||||
Sbjct 63095 CGCACCAGGTCTTTTATTACCACCCTGGTCAACATAACGGGCGGTGTTATTGAAAACACG 63154
Query 156104 TAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGA 156163
| ||||||||| | ||| || ||||| || || || || ||| | ||||||| |||
Sbjct 63155 AATCATAGGAATTAAACCGTTAGAAGTACCGTTTGTACCAGCAATGTAAGAACCAGTTGA 63214
Query 156164 GCGAACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTC 156223
|||| ||||| |||||||| ||||||||||| | ||| ||||| ||| |||||
Sbjct 63215 ACGAATGTTATGGATATGTAGACCAATACCACCAGCAGTTTTGGAAATCAAAGCACATTC 63274
Query 156224 CTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGA 156283
||| | || | | |||| || || ||||| || || | ||| | | | | || ||
Sbjct 63275 CTTCAAGGTGTCGTAAATCCCCTCGATAGAGTCCTCCTTCATGGCAACCAAGAAACAAGA 63334
Query 156284 ACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATA 156343
| ||||||| ||| || || || ||||| | || || | || ||| |||||||
Sbjct 63335 GGACATTTGAGGTTTTGGAGTACCGGCATTGAACAACGTTGGAGAGGCGTGAGTAAAATA 63394
Query 156344 CTTATTAGACAT 156355
|| ||||||
Sbjct 63395 TTTTAGAGACAT 63406
>seq193
Length=188703
Score = 147 bits (162), Expect = 6e-30
Identities = 240/341 (70%), Gaps = 6/341 (2%)
Strand=Plus/Plus
Query 156012 ATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACCATTCCTCTTG---CCACCC 156068
||||| | ||| |||||||| | | || ||| |||| |||||| ||||||
Sbjct 37521 ATATCTGCATGCCATGGCTCCAAGAAAAGGGCGAAAGCACCAGGTCTCTTGTTACCACCC 37580
Query 156069 TGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAATACCATTGGAA 156128
|| || ||||| || ||||| |||||||| |||| | ||||||||| | || || |||
Sbjct 37581 TGGTCCACATAACGGGCAGTATTATTGAAAACACGAATCATAGGAATCAACCCGTTTGAA 37640
Query 156129 GTGCCATTGGTTCC-GCGAATATGCGAACCAGATGAGCGAACATTATGAATATGTAGTCC 156187
|| || ||||| || |||| ||| ||||| | || || | || | ||||| || ||
Sbjct 37641 GTACCGTTGGTACCAGCGA-TATAAGAACCTGTGGAACGGATGTTGTTGATATGAAGACC 37699
Query 156188 AATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATTGAAAATACCTTC 156247
|| |||||||| ||| ||||| ||| ||||| || | ||||| ||||||||||
Sbjct 37700 AACACCACCTGCAGTTTTGGAAATCATAGCACATTCTTTCAAAGTATCATAAATACCTTC 37759
Query 156248 AATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTGAGGTCGTGGTGTTCC 156307
||||| ||||| | ||| | | || | || ||| | |||||| |||| || ||
Sbjct 37760 GATAGAGTCATCCTTCATGGCAATTAAGAAACATGAAGACATTTGAGGATGTGGCGTACC 37819
Query 156308 AGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATA-CTTA 156347
||||||||||| || || | || ||| | || || ||||
Sbjct 37820 AGCGTTGAATAAAGTTGGGGAAGCGTGAGTGAAGTATCTTA 37860
>seq2
Length=397548
Score = 131 bits (144), Expect = 5e-25
Identities = 256/378 (68%), Gaps = 3/378 (1%)
Strand=Plus/Plus
Query 288849 CCTATCAAACCTACCAGAACGAGTTAATGCTGGGTCTAATATATCGGCTCTGTTTGTTGC 288908
||| ||||| ||||||| | ||||||| || | ||||||| ||| || || |
Sbjct 234520 CCTGTCAAATCTACCAGGCCTTAATAATGCTTTATCGAGAATATCGGGTCTATTGGTACC 234579
Query 288909 TGCCAATACAACAATAGATTCGGTTTGCTTAAATCCATCCATACTTGTTAAAATTTGATT 288968
|| || ||||||| || | | | | || |||||||| | ||| ||||||||
Sbjct 234580 AGCTAAAACAACAACGTGGTCAGCTGGAGTGAAACCATCCATTTCTACTAACATTTGATT 234639
Query 288969 AAGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAATCACCCGAATCGCTCCttttttt 289028
|| || | || || |||||||| | |||| ||| |||| | || ||||
Sbjct 234640 TAGCGTGTTCTCTCTCTCATCATTGGCACCTGAAAAATTACCCTTTTGTCTTGCTTTT-- 234697
Query 289029 ACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTGC 289088
|| | |||||||||||||||||| || | | | || | ||||| ||| ||| ||
Sbjct 234698 -CCTATAGCATCAATTTCGTCAATAAACACAATCGAGGGTGCATTTTCTCTTGCAGTTTT 234756
Query 289089 AAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAGC 289148
|| || |||||||| | | ||| |||| ||||||| |||||||||||||||| ||| |
Sbjct 234757 GAACAAATCTCTTACTCTTGCTGCACCAACACCAACAAACATTTCTACAAATTCTGAACC 234816
Query 289149 GGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTT 289208
|| || | || | ||| ||||| |||||| |||| | || || | || ||
Sbjct 234817 AGAAACAAAATAAAACGGAACACCGGCTTCACCTGCTGTTGCCTTTGCAAGCAAAGTTTT 234876
Query 289209 ACCTGTTCCAGGTGGTCC 289226
||| || || ||||| ||
Sbjct 234877 ACCGGTACCTGGTGGACC 234894
>seq1
Length=692720
Score = 102 bits (112), Expect = 2e-16
Identities = 135/184 (73%), Gaps = 4/184 (2%)
Strand=Plus/Plus
Query 302539 TTTCTTACGGTCATATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGC 302598
|||||| ||| |||| ||| || ||| || ||||| | | || | |||||||||
Sbjct 161466 TTTCTTGTGGTGTTATCGTAATGAACCATGATATCTTCTAGAGCTTTCACTAAACGACGT 161525
Query 302599 TGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCC 302658
||||||||||| ||| | |||||| || || ||||| || ||||| |||||||||||
Sbjct 161526 TGAATATAACCTGTTTCGGCTGTTTTGACGGCGGTATCGATAAGACCTTCACGACCACCC 161585
Query 302659 ATAGCATGGAAGAATAGCTCT--TCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGA 302716
|| |||||||| || | ||| | |||| | || | ||| | | ||| ||||||| |
Sbjct 161586 ATTGCATGGAAAAAAAATTCTTGTGGGGTC-AAACCTCTCAA-ATATGAGTTCTCAACAA 161643
Query 302717 AACC 302720
||||
Sbjct 161644 AACC 161647
>seq574
Length=469929
Score = 86.0 bits (94), Expect = 2e-11
Identities = 107/147 (73%), Gaps = 0/147 (0%)
Strand=Plus/Minus
Query 233269 TGTAGCACCGTGAGCAATCATACAATCACGTTCCATTTCACCAATACGCAGACCACCATC 233328
|| |||||| | || || | |||||| | ||||| ||||| | | ||||||||||||
Sbjct 329371 TGAAGCACCATACGCGATTACACAATCCCTCTCCATCTCACCCAACCTCAGACCACCATC 329312
Query 233329 ATTTGACCTACCCTGGACTGTTTGACGAGTTAAAACAGTTCTTGGACCCTGAGCACGATA 233388
|||| ||||||| || |||||| || ||||||| |||||||| |||| |
Sbjct 329311 TCTTGATCTACCCTCAGTTGGTTGACGTGTCAAAACAGCCCTTGGACCACGAGCTCTTGC 329252
Query 233389 ATTAATTTTATCTTTAACCATATGCTT 233415
|| || |||||| |||||||||||
Sbjct 329251 ATGCATCTTATCTAAGACCATATGCTT 329225
Score = 84.2 bits (92), Expect = 6e-11
Identities = 110/150 (73%), Gaps = 2/150 (1%)
Strand=Plus/Minus
Query 251839 TGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGT 251898
||||| | |||||||||| ||||||||||| || || || || | || || |
Sbjct 439329 TGGGCAACAGTCATACGAGATGGAATAGCATGAGGGTTAATAATCAAATCTGGAACAATA 439270
Query 251899 CCATCAGCAGTGAAGGGCATATCCTTTTCCTCAATAA-TGTTTCCAATAGTTCCCTTTTG 251957
|| || || || || |||||||| || || | ||| || | |||||||| ||||||||
Sbjct 439269 CCTTCTGCGGTAAATGGCATATC-TTCTCTACGATATGTGATACCAATAGTACCCTTTTG 439211
Query 251958 TCCGTGACGAGAACTGAACTTATCACCAAT 251987
|||||||||||| || || ||||||||
Sbjct 439210 ACCGTGACGAGAAGCAAATTTGTCACCAAT 439181
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471803041884164
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