Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178335.1_202017-04- 21] 772 sequences; 11,804,229 total letters Query= NC_023611.1 Length=198533 Score E Sequences producing significant alignments: (Bits) Value seq3 98.7 1e-15 >seq3 Length=347946 Score = 98.7 bits (108), Expect = 1e-15 Identities = 206/302 (68%), Gaps = 4/302 (1%) Strand=Plus/Plus Query 168581 AGGTGTTAAAGTTTGGAACGATAATGGTTCTCGTGAATTTTTAGATTT-ATGTGGTTTTA 168639 ||||||||| ||||| ||| |||||| |||||||||| ||||||| ||| |||| | Sbjct 108254 AGGTGTTAAGATTTGGGACGGTAATGGATCTCGTGAATATTTAGATAAGATGGGGTTCAA 108313 Query 168640 CCGAAAGAAAAGAAGGTGATTTAGGTCCAATTTATGGATTTCAATGGAGACATGCAGGAG 168699 || || |||| ||| ||| | || || |||| |||||||||||||| ||| || | Sbjct 108314 A-GATAGGAAAGTAGGAGATCTGGGGCCCGTTTACGGATTTCAATGGAGGCATTTTGGTG 108372 Query 168700 CTCAATATATTGAC-TGTGATACAGATTACACCGGACAAGGAGTAGACCAATTAAGTCAA 168758 || |||| | ||| || ||| || || || |||||||| | || ||||| | || Sbjct 108373 CTAAATACA-AGACGTGCGATGACGACTATACTGGACAAGGTATTGATCAATTGAAACAG 108431 Query 168759 ACTATAAATACTTTACACAACAATCCGGAAAATAGAAGAATATTAATTAATAGTTGGGAT 168818 ||| ||| || | | ||||| | |||||||||| | || | | ||| | Sbjct 108432 GTTATTCATAAACTAAAGACAAATCCCTACGATAGAAGAATCATTATGAGTGCCTGGAAC 108491 Query 168819 GTACCACAACTTGATAAAATGGTTCTTCCCCCTTGTCACACTTTAGTGCAATTTTATGTA 168878 | | | |||| ||||||| | | || || || || | ||| ||||| ||||| Sbjct 108492 CCAGCTGATTTTGACAAAATGGCTTTGCCGCCATGCCATATTTTTTCACAATTCTATGTC 108551 Query 168879 AG 168880 || Sbjct 108552 AG 108553 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635171470536160