Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178335.1_202017-04-
21] 772 sequences; 11,804,229 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq20 163 3e-35
seq612 136 5e-27
seq674 129 7e-25
seq193 125 8e-24
seq18 118 1e-21
seq8 111 2e-19
>seq20
Length=76938
Score = 163 bits (180), Expect = 3e-35
Identities = 164/213 (77%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| || |||||||| || || || |||||||| || || |||||||| || |
Sbjct 32395 ATGCAAATTTTCGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCT 32454
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | |||| || | ||| | |||||||| |||||||| || |||||||||||||||
Sbjct 32455 GACACTATTGACAACGTTAAGTCAAAAATTCAAGACAAGGAAGGTATTCCTCCAGACCAG 32514
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| | | || ||||| ||||| ||||| || |||| | | || || | ||||| |||
Sbjct 32515 CAAAGATTGATCTTTGCCGGTAAACAACTAGAAGATGGTAGAACGCTGTCGGACTACAAT 32574
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
| |||||||| ||||||||||| || ||||||
Sbjct 32575 ATTCAAAAGGAGTCCACTCTTCACCTCGTCTTG 32607
Score = 136 bits (150), Expect = 5e-27
Identities = 158/213 (74%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| || ||||| || || || || |||||||| || || |||||||| ||
Sbjct 32167 ATGCAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCC 32226
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | |||| || | || ||||||||| || || || || || ||||| || ||
Sbjct 32227 GACACTATTGACAACGTCAAAAGTAAAATTCAAGATAAAGAAGGTATCCCTCCGGATCAA 32286
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||| | | |||||||||||||||||||| || |||| | | ||| | | ||||| ||
Sbjct 32287 CAGAGATTGATTTTTGCTGGTAAGCAACTAGAAGATGGTAGAACCTTGTCTGACTACAAC 32346
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
||||||||||||| |||||||| || || |||
Sbjct 32347 ATCCAAAAGGAATCTACTCTTCACCTGGTGTTG 32379
Score = 123 bits (136), Expect = 3e-23
Identities = 149/203 (73%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| |||||||| ||||| | ||||| || || || ||| | |||||||| ||
Sbjct 31711 ATGCAGATCTTTGTTAAGACTTTGACCGGTAAAACCATCACTTTAGAGGTTGAATCCTCC 31770
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | || | || | ||| | ||||| ||||||||||| || || |||||||| ||
Sbjct 31771 GACACGATCGATAACGTTAAGTCGAAAATCCAGGACAAGGAAGGTATCCCTCCAGATCAA 31830
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||| | | || ||||| |||||||| || || || | | | ||| | | ||||| ||
Sbjct 31831 CAGAGGTTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACCTTGTCTGACTACAAC 31890
Query 27586 GTCCAAAAGGAATCCACTCTTCA 27608
||||||||||||| ||||||||
Sbjct 31891 ATCCAAAAGGAATCTACTCTTCA 31913
Score = 118 bits (130), Expect = 1e-21
Identities = 154/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| ||||||||||| || || || |||||||| || || |||||||| || |
Sbjct 31939 ATGCAAATTTTTGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCT 31998
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | || | || | ||| | |||||||| |||||||| || ||||||||||| ||
Sbjct 31999 GACACTATCGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCAA 32058
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| | | || ||||| ||||||||||| || || | | | || || | || |||||
Sbjct 32059 CAAAGATTGATCTTTGCCGGTAAGCAACTGGAAGACGGTAGAACGCTGTCTGATTATAAC 32118
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
| || || || || || | ||| | || |||
Sbjct 32119 ATTCAGAAAGAGTCTACGTTGCATTTGGTGTTG 32151
>seq612
Length=186347
Score = 136 bits (150), Expect = 5e-27
Identities = 158/213 (74%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| || |||||||| | ||||| ||||||||||| || || ||||| || |
Sbjct 177859 ATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTGGAAGTTGAATCTTCT 177800
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | |||| ||| | ||| | || || || |||||||| || ||||| || |||||
Sbjct 177799 GACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGACCAA 177740
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| | | || ||||||||||||||| | || |||| | | || | | ||||| ||
Sbjct 177739 CAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTACAAC 177680
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
||||||||||||| ||||| || | ||||||
Sbjct 177679 ATCCAAAAGGAATCTACTCTACACTTGGTCTTG 177647
>seq674
Length=339435
Score = 129 bits (142), Expect = 7e-25
Identities = 320/476 (67%), Gaps = 21/476 (4%)
Strand=Plus/Plus
Query 81223 TCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAGGGCGGTGAACAGGTCGCG-GCAGCG 81281
|| ||| |||||||||| ||||| ||||| || || | ||||| || | ||| ||
Sbjct 62955 TCGACACGCTTCATGAAAAGATCAGGAATCCATAGAGCAGGGAACAAATCTCTTGCA-CG 63013
Query 81282 CGCCTCCTCATCACCCTGGTTGAGGCGCAACTCGAGAAAGTCCATGATGTCCGCATGCCA 81341
||||| | ||| ||||| | | || | ||| || | ||| || ||||||||
Sbjct 63014 AATTTCCTCTTTACCGTGGTTCTTCCTAATATCAATAAAATCAAAGATATCAGCATGCCA 63073
Query 81342 TGGCTCCAGATACACGGCGATCGACCC----CTTGCGACGGCCACCCTGGTTGACGTAAC 81397
||| ||||| || | ||| | || || ||| | |||||||||| || ||||
Sbjct 63074 TGGTTCCAGGTAAAGGGCAAACGCACCAGGTCTTTT-ATTACCACCCTGGTCAACATAAC 63132
Query 81398 GGGCAGTCGCGTTAAATACACGCAACATAGGGATGATACCATCTGACTGACCGTTCGTAC 81457
|||| || || || ||||| | |||||| || | ||| | || |||||| ||||
Sbjct 63133 GGGCGGTGTTATTGAAAACACGAATCATAGGAATTAAACCGTTAGAAGTACCGTTTGTAC 63192
Query 81458 CCACGATACGCGACCCCTTGGCGCGCACCTTGCTGATTGAAAGACCGATGCCACCTGACC 81517
| | || || || | | || | || ||| ||||| || ||||| | |
Sbjct 63193 CAGCAATGTAAGAACCAGTTGAACGAATGTTATGGATATGTAGACCAATACCACCAG--C 63250
Query 81518 ACTTT--GAAATCTGAGCACACCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCTTT 81575
| ||| |||||| |||||| |||| ||| || ||||| |||||||| || |
Sbjct 63251 AGTTTTGGAAATCAAAGCACATTCCTTCAAGGTGTCGTAAATCCCCTCGATAGAGTCCTC 63310
Query 81576 TTTCATGTCAAGCAAGAAACAGCTTGACATCTGAGGGCTTTTTGAG--CCGGCATTGAAC 81633
|||||| ||| ||||||||| ||||| ||||| |||| ||| ||||||||||||
Sbjct 63311 CTTCATGGCAACCAAGAAACAAGAGGACATTTGAGG--TTTTGGAGTACCGGCATTGAAC 63368
Query 81634 AGTGTTGGGGTCGCGTGAATGAAATAACGGTTT---GACATCAGGTCATAGGTTTC 81686
| ||||| | |||||| | ||||| ||| ||||||| || ||| |||||
Sbjct 63369 AACGTTGGAGAGGCGTGAGTAAAATA---TTTTAGAGACATCAAGTTATACGTTTC 63421
>seq193
Length=188703
Score = 125 bits (138), Expect = 8e-24
Identities = 338/512 (66%), Gaps = 15/512 (3%)
Strand=Plus/Plus
Query 81232 TTCATGAAAGCGTCAGGGATCCAGAGGGCGGTGAACAGGTCGCG-GCAGCGCGCCTCCTC 81290
||||||||| ||||||||||| || || | ||||| || | ||| || || ||
Sbjct 37425 TTCATGAAAAGATCAGGGATCCATAGAGCAGGGAACAAATCTCTTGCA-CGAATTTCTTC 37483
Query 81291 ATCACCCTGGTTGAGGCGCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAG 81350
| ||| || | | | |||| |||||| | ||| || ||||||||||||||||
Sbjct 37484 CTTACCATGTGTTTTTCTGATATCGACAAAGTCGAAGATATCTGCATGCCATGGCTCCAA 37543
Query 81351 ATACACGGCGATCGACCC------CTTGCGACGGCCACCCTGGTTGACGTAACGGGCAGT 81404
| | ||||| | || |||| || ||||||||| || |||||||||||
Sbjct 37544 GAAAAGGGCGAAAGCACCAGGTCTCTTGTTAC---CACCCTGGTCCACATAACGGGCAGT 37600
Query 81405 CGCGTTAAATACACGCAACATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGAT 81464
|| || ||||| | |||||| || | || | ||| |||||| ||||| ||||
Sbjct 37601 ATTATTGAAAACACGAATCATAGGAATCAACCCGTTTGAAGTACCGTTGGTACCAGCGAT 37660
Query 81465 ACGCGACCCCTTGGCGCGCACCTTGCTGATTGAAAGACCGATGCCACCTGACCACTTT-- 81522
| || || ||| || | ||| |||| |||||| | ||||||| || |||
Sbjct 37661 ATAAGAACCTGTGGAACGGATGTTGTTGATATGAAGACCAACACCACCTG--CAGTTTTG 37718
Query 81523 GAAATCTGAGCACACCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATG 81582
|||||| |||||| |||| || |||||||| || ||||| || | ||||||
Sbjct 37719 GAAATCATAGCACATTCTTTCAAAGTATCATAAATACCTTCGATAGAGTCATCCTTCATG 37778
Query 81583 TCAAGCAAGAAACAGCTTGACATCTGAGGGCTTTTTGAGCCGGCATTGAACAGTGTTGGG 81642
||| |||||||| ||||| ||||| | | || || ||||| | ||||||
Sbjct 37779 GCAATTAAGAAACATGAAGACATTTGAGGATGTGGCGTACCAGCGTTGAATAAAGTTGGG 37838
Query 81643 GTCGCGTGAATGAAATAACGGTTTGACATCAGGTCATAGGTTTCCTTGACGCGTGGAATA 81702
| |||||| |||| || | ||||||| | ||| || | | || | |||
Sbjct 37839 GAAGCGTGAGTGAAGTATCTTAACGACATCAAATTATAAGTCTTCAGCACAGATTCGATA 37898
Query 81703 TCGTCACCGTGAATACCGATAGCTACACGCAT 81734
||| ||| || ||||| | || ||||||||
Sbjct 37899 TCGCTACCATGGATACCTAGCGCCACACGCAT 37930
>seq18
Length=102523
Score = 118 bits (130), Expect = 1e-21
Identities = 149/205 (73%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 27414 CTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCAT 27473
||| || ||||| | || || ||||| || ||| | || ||||| || ||| | |||
Sbjct 62289 CTTCGTTAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACCAT 62230
Query 27474 TGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCT 27533
|| ||| | ||| | || || || |||||||| || || || || ||||| || | |
Sbjct 62229 TGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATT 62170
Query 27534 AATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAA 27593
|| ||||||||||||||| | || || | | | || ||| | ||||| || |||||||
Sbjct 62169 GATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACTCTATCTGACTACAACATCCAAAA 62110
Query 27594 GGAATCCACTCTTCATCTAGTCTTG 27618
|||||||||| | ||| | ||||||
Sbjct 62109 GGAATCCACTTTACATTTGGTCTTG 62085
>seq8
Length=175921
Score = 111 bits (122), Expect = 2e-19
Identities = 147/204 (72%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474
||||||||||| | || || ||||| || ||| | || ||||| || ||| | |||
Sbjct 128140 TTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATT 128081
Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534
| ||| | ||| | || ||||| |||||||| || || || || ||||| || | |
Sbjct 128080 GACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTG 128021
Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAG 27594
|| ||||||||||||||| | || || | | | ||| | | ||||| || | |||||
Sbjct 128020 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAAAA 127961
Query 27595 GAATCCACTCTTCATCTAGTCTTG 27618
||||||||| | || ||||||||
Sbjct 127960 GAATCCACTTTGCACTTAGTCTTG 127937
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570304896504640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |