Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178345.1_202017-04- 21] 553 sequences; 11,728,538 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq28 147 2e-30 >seq28 Length=542266 Score = 147 bits (162), Expect = 2e-30 Identities = 340/507 (67%), Gaps = 9/507 (2%) Strand=Plus/Minus Query 13681 CCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttt 13740 || || ||||||| || | |||||| ||||| ||||| || ||||||| |||| ||| Sbjct 233048 CCTTCGTCTCTACAGATCAATTCGTTGGAAAAGGTTAAACCGGGCATCATACCTCTCTTT 232989 Query 13741 tttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAAC 13800 || ||||| || || | || || || ||||| || || | || |||| | ||||| Sbjct 232988 TTCAACCAGAAAATGGAGGCAAAGGAACCGGAGAAAAAGACACCTTCAATGGAGGCAAAG 232929 Query 13801 GCTATTAGTCGTTCTCCAAACGATGCTTTTTTGT-TTGATATCCATTTTCTAGCCCATTC 13859 || | ||||| ||| |||||| | || | || |||| |||||| || ||||||||| Sbjct 232928 GCAACTAGTCTTTCACCAAACAAGGCGTCAGCGTCTTGA-ATCCATCTTAAAGCCCATTC 232870 Query 13860 AGAtttttttttAATAAAATCCATTGTTTCGATTGCATTGAATAAATGTTCCTTCTCTTT 13919 | || | || || || | || |||||||| || ||| | ||||| Sbjct 232869 GGCCTTCTCACCGATTTCTGGGATGGTGTGAATGGCATTGAACAAGAATTCACTTTCTTT 232810 Query 13920 AG--TACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCT 13977 || | ||||| |||| ||||| || | ||| || |||||||||| || ||||| Sbjct 232809 AGGGTCCTTGA--TGTAAGTATCGATCAACAAGGAGTAAGTTTCAGAGTGAATATTTTCA 232752 Query 13978 ATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTACCTCCGAGTAAAAT 14037 || || || ||||| || |||| | || |||| ||| || || | | | || Sbjct 232751 ATCATGATTTGGAAACCGTAGAAACTCTTTGCCTCTGGAATTTGGACTTCGGTGGAGAAG 232692 Query 14038 CTTTCTGCCAAGTTTTCATTAACAATACCATCACTAGCTGCAAAAAATGCCAATATGTTT 14097 |||| |||||||||||||||||||||| ||| ||| || ||||| || | | | Sbjct 232691 TTTTCAACCAAGTTTTCATTAACAATACCGTCAGAAGCGGCGAAAAAGGCAAGAACTCTG 232632 Query 14098 TTAATAAAGTATTGCTCTTCATTGTTGAGT---TTTTTCCAATCGGCTAAATCCTTAGAA 14154 ||| || || ||| | | ||| | | || ||||| || | ||||||||| Sbjct 232631 GAAATGAAAAATCTCTCGTTCTCGTTCATTCTGTTGTTCCAGTCATGGATATCCTTAGAC 232572 Query 14155 AGATCTACTTCATCAACTGTCCAAAAA 14181 | ||| | ||| ||| | ||||| ||| Sbjct 232571 AAATCAATTTCTTCAGCGGTCCAGAAA 232545 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478585491754920