Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178345.1_202017-04- 21] 553 sequences; 11,728,538 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq30 138 9e-28 seq286 131 1e-25 seq8 131 1e-25 seq209 109 4e-19 >seq30 Length=72676 Score = 138 bits (152), Expect = 9e-28 Identities = 169/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || ||||| | || ||||||||| | ||| || ||||| |||||||||||||| | Sbjct 44656 CCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGAC 44715 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || | | || || ||||| || || ||| | ||||||||||| ||||| || ||| Sbjct 44716 AGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGGA 44775 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 ||||| || |||||||| |||||| | || || | || | |||||||||| ||| || Sbjct 44776 ATACCTTCCTTGTCTTG-AATTTTCGACTTAACGTTGTCGATAGTGTCAGAAGATTCAAC 44834 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || |||||||| || || || | || || || || || ||||| Sbjct 44835 CTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACGAAAATTTGCAT 44882 Score = 134 bits (148), Expect = 1e-26 Identities = 168/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || |||||||| | || || | ||||| ||||| || |||||||| || || |||| Sbjct 44200 CCACCCCTCAACCTCAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGAC 44259 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || | | ||| || ||||| || || ||| | |||||||||||||| || || ||| Sbjct 44260 AGCGTTCTACCATCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGA 44319 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 ||||| || |||||||| |||||| | || || | || | |||||||||| ||| || Sbjct 44320 ATACCTTCCTTGTCTTG-AATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAAC 44378 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || |||||||| || || || | || || ||||| || ||||| Sbjct 44379 CTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 44426 Score = 102 bits (112), Expect = 6e-17 Identities = 152/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634 ||||| | ||| | ||||| || || |||||||| ||||| | | || | | || Sbjct 45127 AGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACCGTCT 45186 Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694 || || || || || ||| | ||||||||||| ||||| || || ||||| || |||||| Sbjct 45187 TCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTCT 45246 Query 29695 TGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGT 29753 || |||||| | || || | || | || || ||| ||| ||||| | ||||| || Sbjct 45247 TG-AATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAATGTTATGGT 45305 Query 29754 TTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||| || || || || || || || |||||||| Sbjct 45306 TTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 45338 >seq286 Length=186024 Score = 131 bits (144), Expect = 1e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || ||||| | || ||||| || || || ||||| ||||| ||||| || || | Sbjct 177329 CCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 177388 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || | | ||| || | ||| || |||||| | ||||||||||| || || || ||| Sbjct 177389 AAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGA 177448 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 ||||| || |||||||| | || |||||| | || | |||||||||| ||| ||| Sbjct 177449 ATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 177508 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 || || || ||||| || || ||||| || || || || || ||||| || Sbjct 177509 TCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 177558 >seq8 Length=299443 Score = 131 bits (144), Expect = 1e-25 Identities = 162/219 (74%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || ||||| | || || || || | |||||||||||||||||||| || || | Sbjct 251473 CCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGAC 251532 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||| | | || || | ||| || |||||| | ||||||||||| || || || || Sbjct 251533 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 251592 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 ||||| || |||||||| ||| |||| |||||| | || | |||||||||| ||| || Sbjct 251593 ATACCTTCCTTGTCTTG-AATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 251651 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAA 29777 ||| | ||| || || || ||||| || || || ||||| Sbjct 251652 TTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAA 251690 >seq209 Length=76767 Score = 109 bits (120), Expect = 4e-19 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || || || | || |||||||| | |||||||| ||||| ||||| || || | Sbjct 62074 CCACCTCTTAATCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGAT 62133 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || | | || || | ||| || |||||| | ||||||||||| || || || || Sbjct 62134 AGAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 62193 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 ||||| || |||||||| | || |||||| | || | ||||||||| ||| ||| Sbjct 62194 ATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACT 62253 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAA 29777 || | ||| || || || ||||| || || ||||| || Sbjct 62254 TCCAAAGTGATGGTCTTACCAGTCAAAGTCTTAACGAA 62291 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385216603742973