Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178355.1_202017-04- 21] 1,182 sequences; 11,760,436 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq924 194 1e-44 >seq924 Length=348379 Score = 194 bits (214), Expect = 1e-44 Identities = 551/837 (66%), Gaps = 45/837 (5%) Strand=Plus/Minus Query 101533 TTAAACAGCCATATGCATTTTAATTATAGGGTGTGGGTTATAGTTTTCTAATATAATGTC 101592 ||| ||| ||| | ||||| |||| | || || || ||||| | ||| | | || ||| Sbjct 108873 TTATACACTCATTTTCATTTGAATTCTTGGATGAGGATTATAATCTTCAATTTCAAAGTC 108814 Query 101593 A-TCTGCTTTAAAGTCATCAATGCATGAAACATTTCTAGCAAATCTAAGTGTTGGAAACG 101651 || ||| ||| ||||||||| | ||| | || || | ||| | || || | Sbjct 108813 TGTCAACTTGAAA-TCATCAATGTCTTTAACGTCCCTTTTAATCTTTAGTTTCGGGAATG 108755 Query 101652 GTCTAGGAGTTCGCGTCAACTGCATTTTAAGAGCATCAATGTGATCTACATAGATGTGAG 101711 |||| ||| ||| | | || ||| | ||||||||||| ||| ||| | || | Sbjct 108754 GTCTTGGATTTCTGGAGATTTGTTCTTTCAAGGCATCAATGTGGTCTTTATAAACATGTG 108695 Query 101712 CATCTCCTATAGTATGGATAAACTCTCCAGGCACTAGATTAGTGACATGAGCAATCATGC 101771 |||| || | |||||| || ||||| || ||| | | | || | ||||||||| | Sbjct 108694 CATCCCCCAAAGTATGAATGAACTCACCTGGCTCCATGTCGACAACTTTAGCAATCATTC 108635 Query 101772 AAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAACCCCATATCAGCTGATC 101831 ||| || | || ||| |||||||||||||| ||||| |||||||||||| || | Sbjct 108634 TAGTCAACAAAGCATATGATGCAATGTTAAATGGTACTCCCAACCCCATATCACAAGAAC 108575 Query 101832 TTTGATACAGTTGACAGGAAAG-----------------CTT-TCCATC---------AC 101864 ||| |||| | || ||||| ||| ||| || || Sbjct 108574 GTTGGTACAATAAGCATGAAAGGCGGGGCTTACCGGATCCTTCTCCTTCTTTGGGGAAAC 108515 Query 101865 AGACATAAAATTGACTTAATACATGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAA 101924 |||||| || || || | ||| || || ||||| ||||||| || || | Sbjct 108514 TGACATAGAACTGTGAAAAAATATGGCATGGTGGCAAAGCCATTTTGTCAAAATCAGCTG 108455 Query 101925 CATTCCAAGCACACATTAACATCCTTCTATCTGTAGGG-TTTGTTTTTATAGTATCAATC 101983 ||||| |||| ||| | || |||||||| |||||| ||||| |||| ||| ||| Sbjct 108454 GGTTCCAGGCACTCATAATGATTCTTCTATC-GTAGGGATTTGTCTTTAGTTTATGAATA 108396 Query 101984 AACTGTTTTAATTGGTCAACTCCTTCTCCTTTATAATCGCGCCCAACACCT-TTATATTC 102042 | |||||| ||||| |||| |||| ||| |||| ||| | ||| | || |||| Sbjct 108395 ACCTGTTTCAATTGATCAATACCTTGTCCAGTATAGTCGTCATCG-CACGTCTTGTATTT 108337 Query 102043 TGCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCATCTCTGTC 102102 || || ||||||||||| ||||||||||| || || || ||||||||| | | || || Sbjct 108336 AGCACCAAAATGCCTCCATTGAAATCCATAAACGGGCCCCAGATCTCCTACTTTCCTATC 108277 Query 102103 ATAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAATGTGCACGCC 102162 | || || | ||||||||| || | ||||||||| | |||||||| | || || Sbjct 108276 TTTGAACCCCATCTTATCTAAATATTCACGAGATCCATTACCGTCCCAAATCTTAACACC 108217 Query 102163 -AGCT--GCTGATAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAGTTCTTC 102219 ||| | |||| || || ||| ||| || | ||||||||| ||||| Sbjct 108216 TTGCTCAGACAATAG--GTTAGC-GTCTGTATCACCGGCCAAAAACCACAATAGTTCAAG 108160 Query 102220 AACAACACCTCTCCAAAATACTCTCTTAGTAGTTAAAAGTGGAAA---TTCATTTTCTAA 102276 | | |||||| ||| || |||| || |||| ||||| || |||| ||| Sbjct 108159 TATGATACCTCTAGTAAAGACCTTCTTGGTCGTTAGTAGTGGGAAGGTATCATCACGTAA 108100 Query 102277 ACTAAACCTAGACT---GTGTTCCAAAAATACTCAGTGTTCCAGTCCCTGTTCTGTC 102330 |||||| | || ||| | |||||| ||||| || ||||| |||||||| || Sbjct 108099 ACTAAAACGCAGCTGGGGTGGTGCAAAAAGACTCAACGTACCAGTGCCTGTTCTATC 108043 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361245995950682