Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178365.1_202017-04- 22] 6,295 sequences; 12,671,704 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq6290 336 3e-87 seq6261 194 2e-44 >seq6290 Length=236999 Score = 336 bits (372), Expect = 3e-87 Identities = 1328/2074 (64%), Gaps = 49/2074 (2%) Strand=Plus/Plus Query 52804 CAAT-GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTT 52862 |||| || |||||||| | ||| ||||| | || || | | ||||||||| || || | Sbjct 63439 CAATAGTAAATTGAATTGCAGCAGATGCAGCTTGGGTTCTCAAATAGTACATACCGGTCT 63498 Query 52863 TTAGACCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTCGGATCTG 52922 | | || ||||||||||||||||||||||||||||||| | | || | Sbjct 63499 TCAATCCCTTCTTCCATCCGTAAAAATGCATACTTGTTAGTTTACCCATAGTTGGGGCAC 63558 Query 52923 CTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTT 52982 || | ||||| ||| ||| |||||| || || | | || || ||||| | Sbjct 63559 GTAAGAACAAATTCAAAGAATGAGATTGATCAATATAGACAGAACGATCGGCTGCCATGT 63618 Query 52983 TTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCT 53041 | ||||| |||||||||| ||||||||||| ||| || || || || | ||| |||| | Sbjct 63619 TAATGATAGTCTTTTGTGAAATTTCCCAAACAGTCTTGTATAAGTCCTTCAAT-TCTTGT 63677 Query 53042 GGAAGGTTTG-TATTC--TGAATAGATCCACCATCTACCATAATCCTATTCT---TGATC 53095 |||| |||| || | ||||| || ||| | | ||||| || || | || Sbjct 63678 GGAACATTTGGTAAGCCTTGAATGGAGCCATTTTGTG---TAATCAGATACTGTTTCATA 63734 Query 53096 TCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGA 53155 | |||| ||| | | || || | | || | | || || || || || Sbjct 63735 CCCTCATCCCAAATACCTAAATCAACCAAGTCACGCAGTAAGTAAGGGTTCACAACCTGG 63794 Query 53156 AATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCA 53215 ||||| || || || || | || | ||| ||||| || ||||| | | | ||| Sbjct 63795 AATTCACCGGATAAGACACGACGGGAGTACATATTGGAAGTGACTGGTTCGAAACATTCA 63854 Query 53216 TTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTT 53275 |||| ||||| ||||| | || |||||||| ||||| ||||||| || |||| Sbjct 63855 TTATAACCCAATATTTGGGATGTGGATGCAGTAGGCATTGGTGCCATGGTCAAGGAATTT 63914 Query 53276 CTAAGACCGTATGTTCTGATTTTATCTTTTAG--AGGT-TCCCAATTCCAAAGATCCGAC 53332 |||| ||| ||| | | || |||||||| |||| ||||||| ||| | | | Sbjct 63915 CTAATACC--ATGCT-TCATGATATCTTTTCTTAAGGTGTCCCAATCCCACATGCCGTAG 63971 Query 53333 GGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATAT 53392 ||| ||||| ||||| | | || |||||| | Sbjct 63972 GGTTTTTGGTCCCACATATCAAACTGTAGTATACCTTGAGAAGCAGGAGATCCTTGGAAA 64031 Query 53393 GTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAA 53452 || |||||||| || ||||||| ||||||||||||| || || | | | | |||| Sbjct 64032 GTTTCGTATGGACCGTCCTTCTGAGCTAGTTCACAAGAAGCTTCCATGGAGGCATGATAA 64091 Query 53453 ATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTT 53512 || ||||| ||||| | ||||||| | |||||| ||||||||| || | Sbjct 64092 ATAGTTTCAAAGATTTGGATATTTAGCAAACGGGCTTCCTCAGAATCAAATGGCAAACGT 64151 Query 53513 AAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTA 53572 || || || || | ||| || | ||||||||||| | | | || |||||||||||| || Sbjct 64152 AACAGCATGAAAGTGTCAGCGAGACCTTGAACACCCAAAGCAATTGGTCTATGTCTCATA 64211 Query 53573 TTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGGTTT 53632 || || || |||||| || ||| || |||||| ||| || | | | || | || Sbjct 64212 TTGGATTTTCTCGCTTCTTCAACAGGGTAGTAATTACGATCAATGACTCTGTTTAAATTA 64271 Query 53633 CTGACAATTACTTTGACCACATCCT-TCAGTTTGAGAAAATCAAATTGTCCATCTATTAC 53691 | || ||||| | | || | | | ||| ||| | | ||| | | |||| Sbjct 64272 CGAGTAACAACTTTAGCAATTTCATGTAATTTTTTGAAGTTGTA--TGTGGAAGTCTTAC 64329 Query 53692 AAACATG------TTCAATG-------------CAATAGATGCCAGATTACAAACGGCTA 53732 | | | ||||||| ||| || |||| |||||||| || Sbjct 64330 CATCCTCAGAAGTTTCAATGAATGCTGGTAAGGCAACGGAAGCCAAGTTACAAACAGCAG 64389 Query 53733 CCTCATTAGCATCCGCATATTGTATTATCTCAGTGCA-AAGATTACTACACTTGATGGTT 53791 |||| | | | | |||| | || ||| ||| ||| || | |||||||| Sbjct 64390 TTTCATCTGGAGCTGAGTATTCAACAATTTCACAGCATAAGTTTGATG-ACTTGATGACA 64448 Query 53792 CCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTA 53851 ||||| |||| ||||||| ||| ||||||| |||||||| |||| || ||| || ||| Sbjct 64449 CCTAAGTTTTTTTGATTAGATTTTCTGTTACAAGCATCCTTGTAAACAACGAAAGGTGTA 64508 Query 53852 CCAGTTTCAATCTGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTTTATTATAGAT 53911 ||||||||| | || | ||| | ||| | | ||| | | || || || || Sbjct 64509 CCAGTTTCAGTTTGAGCTTCCAAAATGGAATACCATAATTTTTGGGCTTTGAT---AGTC 64565 Query 53912 TTGTATCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCAAACTCGTCTCCCCAAACA 53971 || | |||| | ||||| | ||||| | ||||||||||| || || | Sbjct 64566 TTACCACGACCTTCTTTCTCGTAGCGGGTATATAGAGCCTCAAACTCGTCACCGTAACAA 64625 Query 53972 TTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACT 54031 | | || |||||| | ||| | | || | ||| || | || | || Sbjct 64626 TCGCTTAAACCAGGAGCTGATGTTGGAGAGAATAATGTCCAGGTCCCATTTTCTTCGACA 64685 Query 54032 CGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCC 54091 || ||||| || |||||||||||||| ||||| || | |||||| | | | |||| Sbjct 64686 CGCTTCATGAAAAGATCAGGAATCCATAGAGCAGGGAACAAATCTCTTGCACGAATTTCC 64745 Query 54092 TCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCC 54151 || || || ||||| ||| ||| | || | | ||||||| |||||| |||||| Sbjct 64746 TCTTTACCGTGGTTCTTCCTAATATCAATAAAATCAAATATATCAGCATGCCATGGTTCC 64805 Query 54152 AAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTG 54211 | ||| | || | | ||||| | ||| || || ||||| || | || | || ||| Sbjct 64806 AGGTAAAGGGCAAACGCACCAGGTCTTTTATTACCACCCTGGTCAACATAACGGGCAGTG 64865 Query 54212 TTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATA 54271 ||||| |||| | | ||| ||||| | ||| || || | ||| || || || | || Sbjct 64866 TTATTGAAAACACGAATCATAGGAATTAAACCGTTAGAAGTACCGTTTGTACCAGCAATG 64925 Query 54272 TAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAG 54331 || ||| | | |||||| ||| || |||||| || || || || |||| || Sbjct 64926 TAAGAACCAGTTGAACGAATGTTATGGATATGTAGACCAATACCACCAGCAGTTTTGGAA 64985 Query 54332 ATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTA 54391 || || || ||| || || || || || || ||||| ||| || ||| ||||| | Sbjct 64986 ATCAAAGCACATTCCTTCAAGGTGTCGTAAATCCCCTCGATAGAGTCCTCCTTCATGGCA 65045 Query 54392 AGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAA 54451 | | ||||| |||||||| | ||| || ||||| || || || ||||| Sbjct 65046 ACCAAGAAACAAGAGGACATTTGAGGTTTTGGAGTACCGGCATTGAACAACGTTGGAGAG 65105 Query 54452 GCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATATCC 54511 ||||| ||||| ||||| ||| | | || ||||| || | ||| | || ||||| Sbjct 65106 GCGTGAGTAAAATATTTTAGAGACATCAAGTTATACGTTTCTAAAGCAGCCTCGATATCT 65165 Query 54512 CATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTG 54571 | || || |||| |||||| | ||| | | || || || | ||| | | |||| Sbjct 65166 CTACCGTGGATGCCTAGTGCGACTCTCATAATTAAATGTTGTGGACGTTCGGCCA-CTTG 65224 Query 54572 -TTGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA-TG 54629 ||| ||| | || || || || |||||||||||||||||||||||| |||| || Sbjct 65225 ACCGTTGATTCTTAGTAAATAAGAACGTTCCAAAGTTTTAAAACCAAAATAACTGTACTG 65284 Query 54630 AAAAGTCTCGTTCGTAAATAATAACTGAGTTGAGTTTATCCTTATATTTGTTAACTACAT 54689 |||| |||| || || | ||| | ||||| | ||||||||| | || | || | || Sbjct 65285 AAAA-TCTCTGTCATAGACAATTGCGGAGTTCAATTTATCCTTGTTTTCCATGACAATAT 65343 Query 54690 CCATGGTAATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGTTAA 54749 | | | || || || |||| | || ||| | || |||||| || || Sbjct 65344 TGTAGACATCATCAGAGATCATGGGAGCGGGCTTACCAGTAGCAGCATTGACGTATCTAT 65403 Query 54750 ATAAATCCTTCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGG 54809 | | ||| | | || | | |||| ||||| | |||| ||| |||| ||| || | || Sbjct 65404 AAAGATCTTCGACAACCTTAGAAAATTGTTTTGTGGTTTGTTTATGTAAATTAGAAATGG 65463 Query 54810 CTATTCTAGCGGCTAGAATGGCATAATCCGGATG 54843 | ||||| || ||||| |||| ||||| ||||| Sbjct 65464 CAATTCTGGCCGCTAGGGTGGCGTAATCTGGATG 65497 >seq6261 Length=85135 Score = 194 bits (214), Expect = 2e-44 Identities = 589/900 (65%), Gaps = 15/900 (2%) Strand=Plus/Plus Query 23824 CTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTT 23883 |||| |||||||| || |||||||| ||| || | |||||||| || ||||| | Sbjct 9208 CTTG-GACATAACACCAGCCTTTTGGTAGTCAGAAACTCTCTTTTCGAAGAAGTTAGTCT 9266 Query 23884 TACCTTCTAATGATATATTTTCCATGAAATCGGATGGATTGGTAACATTATAGA--TTCT 23941 |||| | || || || ||||||||||||||| | || || || || ||| |||| Sbjct 9267 TACCGGCCAAGGAGATGTTTTCCATGAAATCGAAGGGGTTTTCGACCTTGTAGTATTTCT 9326 Query 23942 TTTAAATCCCAATTCAGAAATCAATCTATCTGCGACAAACTCCATATATGTTTTCATCAT 24001 | | | || || | | || ||| || ||||| ||||| | ||| ||||| | Sbjct 9327 TGTTA--CCGAAAGCGACCAACAGTCTGTCGGCGACGAACTCAACGTATTGGTTCATTAA 9384 Query 24002 TTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAAT-TCTT-GTTCA 24059 ||| ||||| |||| | |||||| | || | ||||| | |||| ||||| Sbjct 9385 GTCAGCGTTCATACCTAGCAAAGCAACTGGTAAGGCGTCC--AAGAAGTATCTTTGTTCA 9442 Query 24060 ATAGAGACCGCGTCTGTTATAATAGATCTTACTGTTTCTTCACTCGGTGGATACAATAAA 24119 || || || || || | ||| | || | || ||| | | ||| Sbjct 9443 ATTTCCACAGCCTCGGTGACAATTTTTTCAACAATGGCTGGGTCTGGTTTGTTCTTCAAA 9502 Query 24120 TGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCG 24179 || |||| ||| ||||| || ||| ||| | ||| |||||||||| || |||||| Sbjct 9503 TGGGCGAACAACAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATTCG 9562 Query 24180 TTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAAT 24239 |||||||| || | |||||||| | || | |||||| | ||| || ||||| ||||| Sbjct 9563 TTGGAAAAGGTTAAACCGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAAAG 9622 Query 24240 GATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCG 24299 || || || || || | ||||| | | |||||||||| |||||||| ||| | | Sbjct 9623 GAACCGGAGAAAAAGACACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCAAACAAG 9682 Query 24300 GCG---CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATT 24356 ||| ||| || ||||| || |||||| |||||||||| | || || Sbjct 9683 GCGTCAGCGTCTTGAATCCATCTTAAAGCCCATTCGGCCTTCTCACCGATTTCTGGGATG 9742 Query 24357 GTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATC 24416 || | || ||||| || | | | |||| ||| || || | || ||||| ||| Sbjct 9743 GTGTGAATGGCATTGAACAAGAATTCACTTTCTTTAGGGTCCTTGATGTAGGTATCGATC 9802 Query 24417 AAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACAT 24476 || | || |||| || ||||| |||||||| ||||| || |||||||||| Sbjct 9803 AACAAGGAGTAAGTTTCAGAGTGAATATTTTCAATCATGATTTGGAAACCGTAGAAACTC 9862 Query 24477 CTAGCCTCGGTAATCTGTACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATT 24536 | ||||| | ||| || ||||| | | || ||| | || |||||||| || || Sbjct 9863 TTTGCCTCTGGAATTTGGACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACAATA 9922 Query 24537 CCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCG-TCTGGT-- 24593 |||||| || || ||||| || | || || ||| || | ||| ||| || Sbjct 9923 CCGTCAGAAGCGGCGAAAAAGGCAAGAACTCTGGAAATGAAAAATCTCTCGTTCTCGTTC 9982 Query 24594 GTTAGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAAT 24653 || || ||||| |||| |||||| ||||| | ||| | |||||| | ||||| || Sbjct 9983 ATTCTGTTGTTCCAGTCATGGATATCCTTAGACAAATCAATTTCTTCAGCGGTCCAGAAA 10042 Query 24654 GATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACA 24713 || || || || || || | |||||| ||||| || | || || |||| |||| Sbjct 10043 GAAGCTTCGGCACGCTTGTAGGCTTGCCAGATTTCATGGTACTTGATAGGGAAAAGAACA 10102 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593674881531600