Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178365.1_202017-04- 22] 6,295 sequences; 12,671,704 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq6290 360 3e-94 seq6261 196 6e-45 >seq6290 Length=236999 Score = 360 bits (398), Expect = 3e-94 Identities = 1336/2072 (64%), Gaps = 45/2072 (2%) Strand=Plus/Plus Query 64835 CAAT-GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTT 64893 |||| || |||||||| | ||| ||||| | || || | | ||||||||| || || | Sbjct 63439 CAATAGTAAATTGAATTGCAGCAGATGCAGCTTGGGTTCTCAAATAGTACATACCGGTCT 63498 Query 64894 TTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTG 64953 | | || |||||||||||||||||||||| |||||||| | | || | Sbjct 63499 TCAATCCCTTCTTCCATCCGTAAAAATGCATACTTGTTAGTTTACCCATAGTTGGGGCAC 63558 Query 64954 CTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTT 65013 || | ||||| ||| ||| |||||| || || | | || || ||||| | Sbjct 63559 GTAAGAACAAATTCAAAGAATGAGATTGATCAATATAGACAGAACGATCGGCTGCCATGT 63618 Query 65014 TTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCT 65072 | ||||| |||||||||| ||||||||||| ||| || || || || | ||| |||| | Sbjct 63619 TAATGATAGTCTTTTGTGAAATTTCCCAAACAGTCTTGTATAAGTCCTTCAAT-TCTTGT 63677 Query 65073 GGAAGGTTTG-TATTC--TGAATGGATCCACCATCTGCCATAATCCTATTCT---TGATC 65126 |||| |||| || | |||||||| ||| | || ||||| || || | || Sbjct 63678 GGAACATTTGGTAAGCCTTGAATGGAGCCATTTTGTG---TAATCAGATACTGTTTCATA 63734 Query 65127 TCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGA 65186 | |||| ||| | | || || | | || | | || || || || || Sbjct 63735 CCCTCATCCCAAATACCTAAATCAACCAAGTCACGCAGTAAGTAAGGGTTCACAACCTGG 63794 Query 65187 AATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCA 65246 ||||| || || || || | || | ||| ||||| || ||||| | | | ||| Sbjct 63795 AATTCACCGGATAAGACACGACGGGAGTACATATTGGAAGTGACTGGTTCGAAACATTCA 63854 Query 65247 TTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTT 65306 |||| ||||| ||||| | || |||||||| ||||| ||||||| || |||| Sbjct 63855 TTATAACCCAATATTTGGGATGTGGATGCAGTAGGCATTGGTGCCATGGTCAAGGAATTT 63914 Query 65307 CTAAGACCGTATGTTCTGATTTTATCTTTTAG--AGGT-TCCCAATTCCAAAGATCCGAC 65363 |||| ||| ||| | | || |||||||| |||| ||||||| ||| | | | Sbjct 63915 CTAATACC--ATGCT-TCATGATATCTTTTCTTAAGGTGTCCCAATCCCACATGCCGTAG 63971 Query 65364 GGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATAT 65423 ||| ||||| ||||| | | || |||||| | Sbjct 63972 GGTTTTTGGTCCCACATATCAAACTGTAGTATACCTTGAGAAGCAGGAGATCCTTGGAAA 64031 Query 65424 GTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAA 65483 || |||||||| || ||||||| ||||||||||||| || || | | | | |||| Sbjct 64032 GTTTCGTATGGACCGTCCTTCTGAGCTAGTTCACAAGAAGCTTCCATGGAGGCATGATAA 64091 Query 65484 ATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTT 65543 || ||||| ||||| | ||||||| | |||||| ||||||||| || | Sbjct 64092 ATAGTTTCAAAGATTTGGATATTTAGCAAACGGGCTTCCTCAGAATCAAATGGCAAACGT 64151 Query 65544 AAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTA 65603 || || || || | ||| || | ||||||||||| | | | || |||||||||||| || Sbjct 64152 AACAGCATGAAAGTGTCAGCGAGACCTTGAACACCCAAAGCAATTGGTCTATGTCTCATA 64211 Query 65604 TTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTT 65663 || || || |||||| || ||| || |||||| ||| || | | | || | ||| Sbjct 64212 TTGGATTTTCTCGCTTCTTCAACAGGGTAGTAATTACGATCAATGACTCTGTTTAAATTA 64271 Query 65664 C---TGACAATT-----ACTTTGACCACATCCTTC--AGTT---TGAGAAAATCAAATCG 65710 | | |||| | | ||| | || || |||| || | || || | | Sbjct 64272 CGAGTAACAACTTTAGCAATTTCATGTAATTTTTTGAAGTTGTATGTGGAAGTCTTACCA 64331 Query 65711 --CTCATCTATTACAAACA-TGTTC--AATGCAACAGATGCCAGATTACAAACGGCTACC 65765 |||| || ||| | || | || ||||| || |||| |||||||| || Sbjct 64332 TCCTCAGAAGTTTCAATGAATGCTGGTAAGGCAACGGAAGCCAAGTTACAAACAGCAGTT 64391 Query 65766 TCATTAGCATCCGCATATTGTATTATCTCAGTGCA-AAGATTACTACACTTGATGGTTCC 65824 |||| | | | | |||| | || ||| ||| ||| || | |||||||| || Sbjct 64392 TCATCTGGAGCTGAGTATTCAACAATTTCACAGCATAAGTTTGATG-ACTTGATGACACC 64450 Query 65825 TAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACC 65884 ||| |||| ||||||| ||| ||||||| |||||||| |||| || ||| || ||||| Sbjct 64451 TAAGTTTTTTTGATTAGATTTTCTGTTACAAGCATCCTTGTAAACAACGAAAGGTGTACC 64510 Query 65885 AGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTT 65944 ||||||| | |||| ||| | ||| | | ||| | | | || || || || || Sbjct 64511 AGTTTCAGTTTGAGCTTCCAAAATGGAATACCATAATTTTTGGGCTTTGAT---AGTCTT 64567 Query 65945 GTATCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATT 66004 | |||| | ||||| | ||||| | || |||||||| || || || Sbjct 64568 ACCACGACCTTCTTTCTCGTAGCGGGTATATAGAGCCTCAAACTCGTCACCGTAACAATC 64627 Query 66005 GTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCG 66064 | || |||||| | ||| | | || | ||| || | || | || || Sbjct 64628 GCTTAAACCAGGAGCTGATGTTGGAGAGAATAATGTCCAGGTCCCATTTTCTTCGACACG 64687 Query 66065 TTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTC 66124 ||||| || |||||||||||||| ||||| || |||||||| | | | |||||| Sbjct 64688 CTTCATGAAAAGATCAGGAATCCATAGAGCAGGGAACAAATCTCTTGCACGAATTTCCTC 64747 Query 66125 GTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAA 66184 || || ||||| ||| ||| | || | | |||||| |||||| ||||||| Sbjct 64748 TTTACCGTGGTTCTTCCTAATATCAATAAAATCAAATATATCAGCATGCCATGGTTCCAG 64807 Query 66185 GTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTT 66244 ||| | ||| | | ||||| | ||| || || ||||| || | || | || ||||| Sbjct 64808 GTAAAGGGCAAACGCACCAGGTCTTTTATTACCACCCTGGTCAACATAACGGGCAGTGTT 64867 Query 66245 ATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATA 66304 ||| |||| | | ||| ||||| | ||| || || ||||| || || || | || || Sbjct 64868 ATTGAAAACACGAATCATAGGAATTAAACCGTTAGAAGTACCGTTTGTACCAGCAATGTA 64927 Query 66305 GCTTCCACTTGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGAT 66364 ||| ||| |||||| ||| || |||||| || || || || |||| || || Sbjct 64928 AGAACCAGTTGAACGAATGTTATGGATATGTAGACCAATACCACCAGCAGTTTTGGAAAT 64987 Query 66365 TAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAG 66424 || || ||| || || || || || || ||||| ||| || ||| ||||| || Sbjct 64988 CAAAGCACATTCCTTCAAGGTGTCGTAAATCCCCTCGATAGAGTCCTCCTTCATGGCAAC 65047 Query 66425 TAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGC 66484 | ||||| |||||||| | ||| || ||||| || || || ||||| || Sbjct 65048 CAAGAAACAAGAGGACATTTGAGGTTTTGGAGTACCGGCATTGAACAACGTTGGAGAGGC 65107 Query 66485 GTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCA 66544 ||| ||||| ||||| ||| | | || ||||| || | ||| | || ||||| | Sbjct 65108 GTGAGTAAAATATTTTAGAGACATCAAGTTATACGTTTCTAAAGCAGCCTCGATATCTCT 65167 Query 66545 TTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTG-T 66603 || || |||| |||||| | ||| | | || || || | ||| | | |||| Sbjct 65168 ACCGTGGATGCCTAGTGCGACTCTCATAATTAAATGTTGTGGACGTTCGGCCA-CTTGAC 65226 Query 66604 TGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA-TGAA 66662 ||| ||| | | || || || |||||||||||||||||||||||| |||| |||| Sbjct 65227 CGTTGATTCTTAGTAAATAAGAACGTTCCAAAGTTTTAAAACCAAAATAACTGTACTGAA 65286 Query 66663 AAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCC 66722 || |||| || || | ||| | ||||| | ||||||||| | || | || | || Sbjct 65287 AA-TCTCTGTCATAGACAATTGCGGAGTTCAATTTATCCTTGTTTTCCATGACAATATTG 65345 Query 66723 ATGGTAATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGTTGAAT 66782 | | | || || || |||| | || ||| | || |||||| || | | Sbjct 65346 TAGACATCATCAGAGATCATGGGAGCGGGCTTACCAGTAGCAGCATTGACGTATCTATAA 65405 Query 66783 AAATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCT 66842 | ||| || | || | | |||| ||||| | |||| ||| |||| ||| || | ||| Sbjct 65406 AGATCTTCGACAACCTTAGAAAATTGTTTTGTGGTTTGTTTATGTAAATTAGAAATGGCA 65465 Query 66843 ATTCTAGCGGCTATAATGGCATAATCCGGATG 66874 ||||| || |||| |||| ||||| ||||| Sbjct 65466 ATTCTGGCCGCTAGGGTGGCGTAATCTGGATG 65497 >seq6261 Length=85135 Score = 196 bits (216), Expect = 6e-45 Identities = 588/899 (65%), Gaps = 13/899 (1%) Strand=Plus/Plus Query 35847 CTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTT 35906 |||| |||||||| || |||||||| ||| || | |||||||| || ||||| | Sbjct 9208 CTTG-GACATAACACCAGCCTTTTGGTAGTCAGAAACTCTCTTTTCGAAGAAGTTAGTCT 9266 Query 35907 TACCTTCTAATGATATATTTTCCATGAAATCGAATGGATTGATAACATTATAAAtttttt 35966 |||| | || || || ||||||||||||||||| || || || || || ||| | Sbjct 9267 TACCGGCCAAGGAGATGTTTTCCATGAAATCGAAGGGGTTTTCGACCTTGTAGTATTTCT 9326 Query 35967 tAAATCCCAATTCAGAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTT 36026 | || || | | || ||| || ||||| || || | ||| ||||| | | Sbjct 9327 TGTTACCGAAAGCGACCAACAGTCTGTCGGCGACGAACTCAACGTATTGGTTCATTAAGT 9386 Query 36027 CACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAAT-TCTT-GTTCAAT 36084 || ||||| |||| | |||||| | || | ||||| | |||| ||||||| Sbjct 9387 CAGCGTTCATACCTAGCAAAGCAACTGGTAAGGCGTCC--AAGAAGTATCTTTGTTCAAT 9444 Query 36085 AGAGACCGCGTCTGTTATAATAGATATTACTGTTTCTTCACTCGGTGGATACAATAAATG 36144 || || || || | ||| | || | || ||| | | ||||| Sbjct 9445 TTCCACAGCCTCGGTGACAATTTTTTCAACAATGGCTGGGTCTGGTTTGTTCTTCAAATG 9504 Query 36145 TTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTT 36204 |||| ||| ||||| || ||| ||| | ||| |||||||||| || |||||||| Sbjct 9505 GGCGAACAACAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATTCGTT 9564 Query 36205 GGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGA 36264 |||||| || | |||||||| | || | |||||| | ||| || ||||| ||||| || Sbjct 9565 GGAAAAGGTTAAACCGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAAAGGA 9624 Query 36265 TCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAAC---- 36320 || || || || | ||||| | | |||||||||| ||||| || ||| ||| Sbjct 9625 ACCGGAGAAAAAGACACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCA-AACAAGG 9683 Query 36321 CGGCACTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTG 36380 || || ||| || ||||| || |||||| |||||||||| | || || | Sbjct 9684 CGTCAGCGTCTTGAATCCATCTTAAAGCCCATTCGGCCTTCTCACCGATTTCTGGGATGG 9743 Query 36381 TCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCA 36440 | | || ||||| || | | | |||| ||| || || | || ||||| |||| Sbjct 9744 TGTGAATGGCATTGAACAAGAATTCACTTTCTTTAGGGTCCTTGATGTAGGTATCGATCA 9803 Query 36441 AAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATC 36500 | | || |||| || ||||| |||||||| ||||| || |||||||||| Sbjct 9804 ACAAGGAGTAAGTTTCAGAGTGAATATTTTCAATCATGATTTGGAAACCGTAGAAACTCT 9863 Query 36501 TAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTC 36560 | ||||| | ||| || ||||| || | || ||| | || |||||||| || || | Sbjct 9864 TTGCCTCTGGAATTTGGACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACAATAC 9923 Query 36561 CGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTT-TGGT--G 36617 ||||| || || ||||| || | || || ||| || | ||||| | || Sbjct 9924 CGTCAGAAGCGGCGAAAAAGGCAAGAACTCTGGAAATGAAAAATCTCTCGTTCTCGTTCA 9983 Query 36618 TTAGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATG 36677 || || ||||| |||| |||||| ||||| | ||| | |||||| | ||||| || | Sbjct 9984 TTCTGTTGTTCCAGTCATGGATATCCTTAGACAAATCAATTTCTTCAGCGGTCCAGAAAG 10043 Query 36678 ATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACA 36736 | || || || || || | |||||| ||||| || | || || |||| |||| Sbjct 10044 AAGCTTCGGCACGCTTGTAGGCTTGCCAGATTTCATGGTACTTGATAGGGAAAAGAACA 10102 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658121010027800