Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178365.1_202017-04-
22] 6,295 sequences; 12,671,704 total letters
Query= NC_021246.1
Length=281182
Score E
Sequences producing significant alignments: (Bits) Value
seq6227 194 3e-44
seq6232 147 4e-30
seq4934 129 1e-24
seq6221 114 2e-20
seq4006 107 3e-18
seq1601 100 5e-16
>seq6227
Length=33105
Score = 194 bits (214), Expect = 3e-44
Identities = 185/237 (78%), Gaps = 0/237 (0%)
Strand=Plus/Plus
Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183
||||| |||||||||||||||| | ||||| || | |||| || || || ||
Sbjct 303 AATTTGCATACCACCTCTCAATCTCAACACCAGGTGAAGAGTAGATTCCTTTTGGATGTT 362
Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243
||||| || || |||||| ||| |||| ||| || || |||||||| |||||||||||
Sbjct 363 GTAGTCAGACAAGGTTCTACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTG 422
Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303
||| ||||| || |||||||||||||| ||||| |||| | || |||||| |||||
Sbjct 423 ATCCGGAGGGATACCTTCTTTATCTTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGA 482
Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
||| ||||| ||||| |||||||| || |||||||| ||||| || || ||||||||
Sbjct 483 AGATTCAACCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 539
Score = 194 bits (214), Expect = 3e-44
Identities = 185/237 (78%), Gaps = 0/237 (0%)
Strand=Plus/Plus
Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183
||||| |||||||||||||||| | |||| |||||| |||| |||||| ||| ||
Sbjct 531 AATTTGCATACCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTT 590
Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243
||| || || | ||||||| || || | ||| || |||||||| || ||||| |||||
Sbjct 591 ATAATCAGACAGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAGATCAATCTTTGTTG 650
Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303
||| ||||| || ||||| || ||||| ||||| |||| | || |||||| |||||
Sbjct 651 ATCTGGAGGAATACCTTCCTTGTCTTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGA 710
Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
||| ||||| ||||| |||||||| || |||||||| ||||| || || ||||||||
Sbjct 711 AGATTCAACCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 767
Score = 168 bits (186), Expect = 1e-36
Identities = 189/252 (75%), Gaps = 2/252 (1%)
Strand=Plus/Plus
Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183
||||| |||||||||||||||| | |||| |||||| |||| |||||| ||| ||
Sbjct 759 AATTTGCATACCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTT 818
Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243
||| || || | ||||||| || || | ||| || |||||||| || ||||| |||||
Sbjct 819 ATAATCAGACAGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAGATCAATCTTTGTTG 878
Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303
||| ||||| || ||||| || ||||| ||||| | || | || || ||||||||
Sbjct 879 ATCTGGAGGGATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGA 938
Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT--T 193361
||| |||||||| | ||||| |||||||| || | || || || || || ||||| |
Sbjct 939 AGATTCAACTTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCATAAT 998
Query 193362 TTATTAGTAAAA 193373
||||||| |||
Sbjct 999 CTATTAGTTAAA 1010
Score = 152 bits (168), Expect = 9e-32
Identities = 171/229 (75%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 193132 TACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGG 193191
||||||| ||||| | | || || || | || | ||| || |||||| ||||| |
Sbjct 83 TACCACCCCTCAACCTCAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCG 142
Query 193192 ATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAG 193251
| | ||||||| ||| |||| ||| || ||||||||||| ||||| || || || ||||
Sbjct 143 ACAGCGTTCTACCATCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAG 202
Query 193252 GTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAA 193311
| || ||||| || ||||| ||||| | || | || |||||| || ||||| ||||
Sbjct 203 GAATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAA 262
Query 193312 CTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
| ||||| |||||||| |||||||| || || || || || ||||||||
Sbjct 263 CCTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACGAAAATTTGCAT 311
>seq6232
Length=37552
Score = 147 bits (162), Expect = 4e-30
Identities = 171/231 (74%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 193133 ACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGA 193192
|||||||||||||| | |||| || | |||| || || || || ||||||||
Sbjct 28878 ACCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGA 28937
Query 193193 TAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGG 193252
|| |||||| ||| || ||||| || || ||||| || ||||| ||||| ||||| ||
Sbjct 28938 CAAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 28997
Query 193253 TATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAAC 193312
|| ||||| || ||||| || |||| || | ||| |||||| || ||||| |||||
Sbjct 28998 AATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 29057
Query 193313 TTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363
||| || || ||||| ||||| |||| || || || || |||||||| ||
Sbjct 29058 TTCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 29108
>seq4934
Length=586
Score = 129 bits (142), Expect = 1e-24
Identities = 161/221 (73%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
|||||||||||||||| | || | ||||| || | ||||| ||| || |||||
Sbjct 457 ATACCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCA 398
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
|| || |||||| || || ||||| || || ||||| || ||||| ||||| |||||
Sbjct 397 GACAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGT 338
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| || ||||| || ||||| || || | || | ||| |||||| || ||||| |||
Sbjct 337 GGGATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCA 278
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAA 193351
||||| | ||| || || ||||| || | || || |||||
Sbjct 277 ACTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAA 237
>seq6221
Length=28208
Score = 114 bits (126), Expect = 2e-20
Identities = 149/206 (72%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
||||||||||| |||| | |||| ||| || || | || || || || |||||
Sbjct 21480 ATACCACCTCTTAATCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCA 21539
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
|||| |||||| || || ||||| || || ||||| || ||||| ||||| |||||
Sbjct 21540 GATAGAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGT 21599
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| || ||||| || ||||| || |||| || | ||| ||| || || ||||| |||
Sbjct 21600 GGGATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCA 21659
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGT 193336
||||| | ||| || || ||||| ||
Sbjct 21660 ACTTCCAAAGTGATGGTCTTACCAGT 21685
>seq4006
Length=251
Score = 107 bits (118), Expect = 3e-18
Identities = 133/182 (73%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 193179 ATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTC 193238
|| || ||||| || || |||||| || |||| || || |||||||| || || |||
Sbjct 25 ATGTTGTAGTCAGACAAGGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAACCTC 84
Query 193239 TGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTA 193298
|||||||| ||||| || ||||| || || || ||||| | || | || || ||
Sbjct 85 TGTTGATCTGGAGGGATACCTTCCTTGTCCTGGATTTTCGACTTAACGTTATCGATCGTG 144
Query 193299 TCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGC 193358
||||| || ||||| |||| ||| || |||||||| || | || || ||||| || |||
Sbjct 145 TCGGAGGATTCAACCTCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGC 204
Query 193359 AT 193360
||
Sbjct 205 AT 206
>seq1601
Length=125
Score = 100 bits (110), Expect = 5e-16
Identities = 97/125 (78%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 193227 AAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATA 193286
|| || ||||| |||||||| ||||| || ||||| || ||||| ||||| | || |
Sbjct 1 AAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTCTTGAATTTTCGACTTAACG 60
Query 193287 TTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTT 193346
|| || ||||||||||| ||||| ||||| |||||||| |||||||| || || ||
Sbjct 61 TTGTCGATGGTATCGGAAGATTCAACCTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTG 120
Query 193347 ACAAA 193351
|||||
Sbjct 121 ACAAA 125
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 899583608444400
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