Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178365.1_202017-04-
22] 6,295 sequences; 12,671,704 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq6227 123 2e-23
>seq6227
Length=33105
Score = 123 bits (136), Expect = 2e-23
Identities = 169/235 (72%), Gaps = 1/235 (0%)
Strand=Plus/Plus
Query 34744 ATCATTT-CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTAT 34802
|||| || || ||||||||||||| ||| ||||||| ||| |||||| ||||| || |
Sbjct 77 ATCAGTTACCACCCCTCAACCTCAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGT 136
Query 34803 AGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGT 34862
||||||| || | | |||| || |||||||| ||||| || |||| || ||||||||
Sbjct 137 AGTCCGACAGCGTTCTACCATCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGT 196
Query 34863 CTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGG 34922
|| | || | || |||||||| | ||||| || ||| | || | ||| |
Sbjct 197 CTGGAGGAATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGAAG 256
Query 34923 CCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| || || | |||||| ||||| || || || ||||| || || || |||||
Sbjct 257 ATTCAACCTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACGAAAATTTGCAT 311
Score = 89.7 bits (98), Expect = 3e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810
|| || ||||| |||| |||| || | || ||| |||||||||||||| || ||
Sbjct 541 CCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGAC 600
Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870
|| | | | || ||||||||||| ||||| ||||||| || ||| || ||| | ||
Sbjct 601 AGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGA 660
Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930
| || |||||||| | ||||| ||||||| | || | || | || ||
Sbjct 661 ATACCTTCCTTGTCTTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACC 720
Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| | |||||| ||||| || || || || || || || || |||||
Sbjct 721 TCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 767
Score = 86.0 bits (94), Expect = 4e-12
Identities = 160/235 (68%), Gaps = 10/235 (4%)
Strand=Plus/Plus
Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810
|| || ||||| |||| |||| || | || ||| |||||||||||||| || ||
Sbjct 769 CCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGAC 828
Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870
|| | | | || ||||||||||| ||||| ||||||| || ||| || ||| | ||
Sbjct 829 AGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGG 888
Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACG-----GATGCTATCGATTCATTGGCCT 34925
| || |||||||| | ||||| || ||| |||| ||||| || |
Sbjct 889 ATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGAT-----T 943
Query 34926 CGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATGAT 34980
| || || | |||||||| || || || | ||||| || || |||||||| ||
Sbjct 944 CAACTTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCATAAT 998
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325667812746605
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |