Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178365.1_202017-04- 22] 6,295 sequences; 12,671,704 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq6227 107 2e-18 >seq6227 Length=33105 Score = 107 bits (118), Expect = 2e-18 Identities = 153/213 (72%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 41651 AACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCG 41710 ||||||| ||||| ||| ||| |||||||||||||| || || || || | |||| Sbjct 784 AACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGACAGCGTTCTACCGTCT 843 Query 41711 TCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCC 41770 || || ||||| ||||| || |||| | ||||| || | || | | ||||||| | Sbjct 844 TCCAGTTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGT-C 902 Query 41771 ATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGT 41829 ||| |||| | | |||| | | | || ||| || || || |||| ||||| || Sbjct 903 TTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAATGTTATGGT 962 Query 41830 TTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||||| |||| ||||| |||||||||||||| Sbjct 963 TTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 995 Score = 98.7 bits (108), Expect = 9e-16 Identities = 151/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 41651 AACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCG 41710 ||||||| ||||| ||| ||| |||||||||||||| || || || || | |||| Sbjct 556 AACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGACAGCGTTCTACCGTCT 615 Query 41711 TCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCC 41770 || || ||||| ||||| || |||| | ||||| || | |||| | ||||||| | Sbjct 616 TCCAGTTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGAATACCTTCCTTGT-C 674 Query 41771 ATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGT 41829 ||| |||| || ||| | | | ||||||| || || ||||| | ||||| || Sbjct 675 TTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGT 734 Query 41830 TTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || || || || || || |||||||| ||||| Sbjct 735 CTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 767 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462267622454000