Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178385.1_202017-04-
21] 464 sequences; 11,758,293 total letters
Query= NC_004778.3
Length=129593
Score E
Sequences producing significant alignments: (Bits) Value
seq34 113 4e-20
seq13 82.4 6e-11
>seq34
Length=79252
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 18815 CCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCC 18874
|| |||| ||| || ||||||| ||| | ||||| |||||||| || ||||| || | |
Sbjct 27863 CCACCTCTCAATCTCAACACCAGGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAC 27804
Query 18875 ATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGC 18934
| ||| | | || || || || ||||| ||| |||| | |||||| |||||| ||
Sbjct 27803 AAGGTTCTACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGG 27744
Query 18935 ACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTT 18994
| || ||||| || |||||| ||| || | | | | ||| ||| || ||
Sbjct 27743 ATACCTTCTTTATCTTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACC 27684
Query 18995 TCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAAAATTTGCAT 19041
|| | ||| || || || ||||||| ||||||||| |||||||||||
Sbjct 27683 TCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 27637
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 18815 CCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCC 18874
|| |||| | ||||| ||| | || || || |||||||| ||||| |||||||| | |
Sbjct 27179 CCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGAC 27120
Query 18875 ATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGC 18934
| ||| | |||| || ||||| ||||| ||| | || | ||| || ||||| ||
Sbjct 27119 AGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGG 27060
Query 18935 ACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTT 18994
| || || ||||| ||||||| || || | | ||| |||||| || || |
Sbjct 27059 ATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACT 27000
Query 18995 TCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAAAATTTGCAT 19041
|| | || ||||||||||| || ||||| ||||| ||||| |||||
Sbjct 26999 TCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 26953
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 18815 CCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCC 18874
|| |||| ||| || ||||||| |||||||||||||| || ||||| || ||||| | |
Sbjct 27635 CCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGAC 27576
Query 18875 ATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGC 18934
| ||| | |||| ||||| || ||||| ||| | || | ||| || ||||| ||
Sbjct 27575 AGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGA 27516
Query 18935 ACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTT 18994
| || || ||||| ||||||| || || | | | | ||| || || ||
Sbjct 27515 ATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACC 27456
Query 18995 TCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAAAATTTGCAT 19041
|| | ||| || || |||||||| | || |||||||||||||||||
Sbjct 27455 TCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 27409
Score = 91.5 bits (100), Expect = 1e-13
Identities = 158/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 18812 TTTCCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCC 18871
|| || || | |||||| || || | ||| | || |||||||||||||||||||| |||
Sbjct 28094 TTACCACCCCTCAACCTCAAGACGAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCC 28035
Query 18872 GCCATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACG 18931
| || ||| | | || || || |||||||| ||| | || | ||| ||||| ||
Sbjct 28034 GACAGCGTTCTACCATCTTCTAGTTGTTTACCGGCAAAGATCAATCTTTGCTGGTCTGGA 27975
Query 18932 GGCACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCC 18991
|| | || || ||||| |||||| || || | | | | ||| || || ||
Sbjct 27974 GGAATACCTTCCTTGTCTTGAATTTTTGACTTAACGTTGTCAATAGTGTCAGAAGATTCA 27915
Query 18992 GTTTCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAAAATTTGCAT 19041
|| | ||| || || |||||||| | || ||||| |||||||||||
Sbjct 27914 ACCTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACGAAAATTTGCAT 27865
>seq13
Length=186795
Score = 82.4 bits (90), Expect = 6e-11
Identities = 156/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 18815 CCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCC 18874
|| |||| ||| || || |||| ||| | ||||| |||||||| || ||||| || | |
Sbjct 178082 CCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 178141
Query 18875 ATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGC 18934
| ||| | | || |||| || ||||| ||| | || | ||| || || || ||
Sbjct 178142 AAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGA 178201
Query 18935 ACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTT 18994
| || || ||||| || || || || | | | | ||| || || || |
Sbjct 178202 ATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 178261
Query 18995 TCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAAAATTTGCATTTT 19044
|| | |||||| || ||||| |||||||| ||||| ||||||||||| ||
Sbjct 178262 TCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 178311
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 414570455590816
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |