Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178385.1_202017-04- 21] 464 sequences; 11,758,293 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq13 95.1 9e-15 seq34 91.5 1e-13 >seq13 Length=186795 Score = 95.1 bits (104), Expect = 9e-15 Identities = 153/219 (70%), Gaps = 6/219 (3%) Strand=Plus/Minus Query 21830 CAAAATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGC 21889 ||| |||||||| || | || || ||||| || || || |||||| ||||| ||| | Sbjct 178312 CAAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTGGAAGTTGAATC 178253 Query 21890 CGCAGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGT---ACCTGT 21946 | || || | | | || | ||| || || || || || ||| | ||||| Sbjct 178252 TTCTGACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTG- 178194 Query 21947 AAACCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGA 22006 ||||||| ||| | ||||||||||| || ||| | |||||| | |||| || |||| Sbjct 178193 --ACCAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGA 178136 Query 22007 TTACAATATTCAGAAGGAATCTACTCTTCATATGGTATT 22045 ||||| || || |||||||||||||| || |||| || Sbjct 178135 CTACAACATCCAAAAGGAATCTACTCTACACTTGGTCTT 178097 >seq34 Length=79252 Score = 91.5 bits (100), Expect = 1e-13 Identities = 97/128 (76%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 21918 AAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAACAGAGACTTATCTTTGCTGGCAAA 21977 |||||| |||||||| ||| | ||| | ||||||||| | || |||||||| || Sbjct 27721 AAAATTCAAGATAAAGAAGGTATCCCTCCGGATCAACAGAGATTGATTTTTGCTGGTAAG 27780 Query 21978 CAACTAGAAGATTTAAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCAT 22037 |||||||||||| | ||| || | || ||||| || || ||||||||||||||||| Sbjct 27781 CAACTAGAAGATGGTAGAACCTTGTCTGACTACAACATCCAAAAGGAATCTACTCTTCAC 27840 Query 22038 ATGGTATT 22045 |||| || Sbjct 27841 CTGGTGTT 27848 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||| || | || ||| | || || || || || ||| | || ||| | | Sbjct 27865 ATGCAAATTTTCGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCT 27924 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | | | ||||| ||||||| || || || ||| | ||| | |||| Sbjct 27925 GACACTATTGACAACGTTAAGTCAAAAATTCAAGACAAGGAAGGTATTCCTCCAGACCAG 27984 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 || ||| | |||||||| || ||||||||||||||| | ||| || | || |||||| Sbjct 27985 CAAAGATTGATCTTTGCCGGTAAACAACTAGAAGATGGTAGAACGCTGTCGGACTACAAT 28044 Query 22014 ATTCAGAAGGAATCTACTCTTCA 22036 ||||| ||||| || |||||||| Sbjct 28045 ATTCAAAAGGAGTCCACTCTTCA 28067 Score = 86.0 bits (94), Expect = 4e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 ||||| || ||| |||| || || || || |||||||| || | || ||| || | Sbjct 27181 ATGCAGATCTTTGTTAAGACTTTGACCGGTAAAACCATCACTTTAGAGGTTGAATCCTCC 27240 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || ||| | | | ||||| ||||| || || || ||| | ||| | | ||| Sbjct 27241 GACACGATCGATAACGTTAAGTCGAAAATCCAGGACAAGGAAGGTATCCCTCCAGATCAA 27300 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 ||||| | |||||||| || || || |||||||| | ||| || | || ||||| Sbjct 27301 CAGAGGTTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACCTTGTCTGACTACAAC 27360 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATT 22045 || || ||||||||||||||||| |||| || Sbjct 27361 ATCCAAAAGGAATCTACTCTTCACTTGGTGTT 27392 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 358122774804256