Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178385.1_202017-04-
21] 464 sequences; 11,758,293 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq34 203 7e-47
seq4 158 3e-33
seq31 150 4e-31
>seq34
Length=79252
Score = 203 bits (224), Expect = 7e-47
Identities = 174/215 (81%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 194926 CTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCA 194985
||||| || ||||||||||||||||| |||||||||||||| || | || ||||| |||
Sbjct 28079 CTCAAGACGAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCA 28020
Query 194986 TCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTG 195045
||||| || || ||||| || ||||| | || ||| |||||||||||||| ||||| |||
Sbjct 28019 TCTTCTAGTTGTTTACCGGCAAAGATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTG 27960
Query 195046 TCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACC 195105
|||||||||||| ||| ||||| ||||| ||||| ||| ||| || || ||||| |
Sbjct 27959 TCTTGAATTTTTGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATA 27900
Query 195106 GTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
||||| ||||||| || || ||||| | ||||||
Sbjct 27899 GTCTTACCTGTCAGTGTCTTGACGAAAATTTGCAT 27865
Score = 174 bits (192), Expect = 3e-38
Identities = 174/223 (78%), Gaps = 2/223 (1%)
Strand=Plus/Minus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAG 194977
||| | |||||| || ||||||||||| || || ||||| || ||||| || | |||| |
Sbjct 27858 TCTCAATCTCAACACCAGGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAG-G 27800
Query 194978 TTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGC 195037
|||| |||||||| || |||||||| || || || | || ||||| || ||||| || |
Sbjct 27799 TTCTACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGGATAC 27740
Query 195038 CTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAA 195097
||||||| ||||||||||| |||||||| ||||| ||||| ||| ||| || || |
Sbjct 27739 CTTCTTTATCTTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTA 27680
Query 195098 GGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|||| | ||||| ||||| | |||||| ||||| | ||||||
Sbjct 27679 GGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 27637
Score = 167 bits (184), Expect = 5e-36
Identities = 170/222 (77%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| | |||||| || | || | || |||||||| ||||| || ||||| | || ||
Sbjct 27630 TCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGACAGCGT 27571
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
||| || ||||| || |||||||| || ||||| | || |||||| ||||||||||| ||
Sbjct 27570 TCTACCGTCTTCCAGTTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGAATACC 27511
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
||| |||||||||||||| ||| ||||| ||||| ||||| ||| ||| || || ||
Sbjct 27510 TTCCTTGTCTTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAG 27451
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
||| | ||||| ||||||| || || || || | ||||||
Sbjct 27450 GGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 27409
Score = 161 bits (178), Expect = 2e-34
Identities = 169/222 (76%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| || || | ||||| || | |||||||| || ||||| |||||||| | || ||
Sbjct 27174 TCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGT 27115
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
||| || ||||| ||||||||||| || ||||| | || |||||| |||||||| || ||
Sbjct 27114 TCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACC 27055
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
||| |||||||||||||| ||| ||||| || ||||| || ||| ||| ||||| |
Sbjct 27054 TTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAA 26995
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| | || || || |||||||| || ||||| | |||||
Sbjct 26994 TGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 26953
Score = 134 bits (148), Expect = 3e-26
Identities = 165/223 (74%), Gaps = 2/223 (1%)
Strand=Plus/Minus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAG 194977
||| | |||||| || | ||||||||| || || ||||| || ||||| || | |||| |
Sbjct 27402 TCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAG-G 27344
Query 194978 TTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGC 195037
|||| || ||||| ||||||||||| || ||||| | | ||||| |||||||| || |
Sbjct 27343 TTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGGGATAC 27284
Query 195038 CTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAA 195097
|||| ||||| || ||||| ||| ||||| || || ||||| || ||| || || |
Sbjct 27283 CTTCCTTGTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACCTCTA 27224
Query 195098 GGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| | || || || |||||||| || || || | |||||
Sbjct 27223 AAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 27181
>seq4
Length=409361
Score = 158 bits (174), Expect = 3e-33
Identities = 165/214 (77%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATC-GGCAAGAG 194977
||| | |||||| || | ||| | |||||| ||||||||||| ||||| || | |||| |
Sbjct 365010 TCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGACAAG-G 365068
Query 194978 TTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGC 195037
|||| || ||||| | |||||||| || ||||| | || ||||||||| || || || |
Sbjct 365069 TTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATAC 365128
Query 195038 CTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAA 195097
|||| ||||||||||| ||| |||||| || ||||| ||||| ||| ||| ||||| |
Sbjct 365129 CTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCA 365188
Query 195098 GGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAA 195131
|| | ||||| || |||||||| || || ||
Sbjct 365189 AAGTGATGGTCTTACCAGTCAAAGTCTTGACAAA 365222
>seq31
Length=102868
Score = 150 bits (166), Expect = 4e-31
Identities = 161/213 (76%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| | |||||| || | || | |||||| || ||||| || ||||| || | |||||
Sbjct 62065 TCTTAATCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAGAGT 62124
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
||| || ||||| | |||||||| || ||||| | || ||||||||| || || || ||
Sbjct 62125 TCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACC 62184
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
||| |||||||| || || |||||| || ||||||||||| ||| ||| ||||| |
Sbjct 62185 TTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCCAA 62244
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAA 195131
|| | ||||| || |||||||| || |||||
Sbjct 62245 AGTGATGGTCTTACCAGTCAAAGTCTTAACGAA 62277
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109475004131888
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |