Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178385.1_202017-04-
21] 464 sequences; 11,758,293 total letters
Query= NC_019945.1
Length=132978
Score E
Sequences producing significant alignments: (Bits) Value
seq13 131 1e-25
seq34 104 2e-17
seq4 102 7e-17
seq31 89.7 4e-13
>seq13
Length=186795
Score = 131 bits (144), Expect = 1e-25
Identities = 167/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 28551 AAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCT 28610
|| |||||||| || || || || ||||| ||||| || |||||| ||| ||| ||
Sbjct 178311 AAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTGGAAGTTGAATCT 178252
Query 28611 TCAGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGAT 28670
|| || || | | | || ||||| || ||| ||||| || || | || ||
Sbjct 178251 TCTGACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGAC 178192
Query 28671 CAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTAT 28730
||||| ||| | |||||||| || || |||||||||||| || |||| || |||| ||
Sbjct 178191 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTAC 178132
Query 28731 AACATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGG 28780
||||| ||||| ||||||||||| ||| |||| || ||||| |||| ||
Sbjct 178131 AACATCCAAAAGGAATCTACTCTACACTTGGTCTTGAGATTGAGAGGTGG 178082
>seq34
Length=79252
Score = 104 bits (114), Expect = 2e-17
Identities = 161/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613
|||||||| ||||| || ||| | || ||||| || || ||| || ||| ||||
Sbjct 27409 ATGCAAATTTTTGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCT 27468
Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673
|| || | | | | | ||| ||||| ||||| || || | || |||||||
Sbjct 27469 GACACTATTGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCAA 27528
Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733
|| ||| | |||||||| || || ||| ||||||| || ||| || | |||||||||
Sbjct 27529 CAAAGATTGATCTTTGCCGGTAAGCAACTGGAAGACGGTAGAACGCTGTCTGATTATAAC 27588
Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783
||||| ||||| ||||| |||| |||| || ||||| |||| || ||
Sbjct 27589 ATTCAGAAAGAGTCTACGTTGCATTTGGTGTTGAGATTGAGAGGTGGTAT 27638
Score = 95.1 bits (104), Expect = 1e-14
Identities = 159/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613
||||| || ||||| || || || || ||||||||||| || || ||| | ||
Sbjct 27181 ATGCAGATCTTTGTTAAGACTTTGACCGGTAAAACCATCACTTTAGAGGTTGAATCCTCC 27240
Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673
|| ||| | | | | ||| |||||| ||||| || || | || |||||||
Sbjct 27241 GACACGATCGATAACGTTAAGTCGAAAATCCAGGACAAGGAAGGTATCCCTCCAGATCAA 27300
Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733
||||| | |||||||| || || || | ||||| || ||| || | || || |||
Sbjct 27301 CAGAGGTTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACCTTGTCTGACTACAAC 27360
Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783
|| ||||| ||||||||||| ||| |||| || ||||| |||| || ||
Sbjct 27361 ATCCAAAAGGAATCTACTCTTCACTTGGTGTTGAGATTGAGAGGTGGTAT 27410
Score = 95.1 bits (104), Expect = 1e-14
Identities = 159/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613
|||||||| || || ||||| |||| || || || || ||| || ||| ||||
Sbjct 27637 ATGCAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCC 27696
Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673
|| || | | | | |||| ||||| || ||||| || | || ||||||
Sbjct 27697 GACACTATTGACAACGTCAAAAGTAAAATTCAAGATAAAGAAGGTATCCCTCCGGATCAA 27756
Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733
|||||| | || ||||| || || ||| | |||||| || ||| || | || || |||
Sbjct 27757 CAGAGATTGATTTTTGCTGGTAAGCAACTAGAAGATGGTAGAACCTTGTCTGACTACAAC 27816
Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783
|| ||||| ||||||||||| ||| |||| || ||||| |||| || ||
Sbjct 27817 ATCCAAAAGGAATCTACTCTTCACCTGGTGTTGAGATTGAGAGGTGGTAT 27866
>seq4
Length=409361
Score = 102 bits (112), Expect = 7e-17
Identities = 157/224 (70%), Gaps = 0/224 (0%)
Strand=Plus/Minus
Query 28563 TTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCAGAGACGGTG 28622
||||| || || || || ||||| ||||| || ||| ||| |||| || || |
Sbjct 365222 TTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATT 365163
Query 28623 GCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAACAGAGACTT 28682
| | || ||||| ||| || ||||| || || | || || ||||| ||| |
Sbjct 365162 GACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTG 365103
Query 28683 ATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAACATTCAAAAA 28742
|||||||| || || ||||||||||| || ||| || | || || ||||||||||||
Sbjct 365102 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAAAA 365043
Query 28743 GAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGATAAT 28786
||||| ||| ||||| | || || ||||| |||| || || ||
Sbjct 365042 GAATCCACTTTGCACTTAGTCTTGAGATTGAGAGGTGGTATCAT 364999
>seq31
Length=102868
Score = 89.7 bits (98), Expect = 4e-13
Identities = 154/224 (69%), Gaps = 0/224 (0%)
Strand=Plus/Minus
Query 28563 TTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCAGAGACGGTG 28622
|| || || || || || ||||| ||||| || ||| ||| |||| || || |
Sbjct 62277 TTCGTTAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACCATT 62218
Query 28623 GCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAACAGAGACTT 28682
| | || ||||| || ||| ||||| || || | || || ||||| ||| |
Sbjct 62217 GACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTG 62158
Query 28683 ATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAACATTCAAAAA 28742
|||||||| || || ||||||||||| || |||| | | || || ||||| |||||
Sbjct 62157 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACTCTATCTGACTACAACATCCAAAAG 62098
Query 28743 GAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGATAAT 28786
||||| ||| | || |||| || |||||| |||| || || ||
Sbjct 62097 GAATCCACTTTACATTTGGTCTTGAGATTAAGAGGTGGTATCAT 62054
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 425402394335856
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |