Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178385.1_202017-04- 21] 464 sequences; 11,758,293 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq34 123 2e-23 seq13 93.3 3e-14 seq4 93.3 3e-14 >seq34 Length=79252 Score = 123 bits (136), Expect = 2e-23 Identities = 167/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||||||||| | |||||||| || ||||| || ||||| |||||||| || || Sbjct 27408 ACCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGA 27349 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | || | |||| || | || || |||||||| ||||| | ||| |||||| | || Sbjct 27348 CAAGGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGG 27289 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | |||||| ||||| |||||| | | ||| | || | |||||| ||||| | Sbjct 27288 GATACCTTCCTTGTCCTGGATTTTC-GACTTAACGTTATCGATCGTGTCGGAGGATTCAA 27230 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | ||||| |||||||| || || || || ||||||||||||||| Sbjct 27229 CCTCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCATA 27180 Score = 120 bits (132), Expect = 2e-22 Identities = 166/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||||||||| | ||||||||||| | || |||||| || ||||| ||||| || Sbjct 27636 ACCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGA 27577 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || || | |||| |||| ||| || |||||||| ||||| | || |||||| | || Sbjct 27576 CAGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGG 27517 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | |||||| ||||| ||||||| | | ||| | ||| | ||||| ||||| | Sbjct 27516 AATACCTTCCTTGTCTTGAATTTTC-GACTTAACGTTGTCAATAGTGTCAGAAGATTCAA 27458 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | || || || |||||||| | || || ||||| || |||||| Sbjct 27457 CCTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCATA 27408 Score = 111 bits (122), Expect = 1e-19 Identities = 164/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||||||||| | | || ||| | ||||| ||| ||| || || ||||||||||| || Sbjct 27180 ACCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGA 27121 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || || | |||| || | || || |||||||| ||||| | || |||||| | || Sbjct 27120 CAGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGG 27061 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | |||||| ||||| ||||||| | | ||| | ||| | ||| ||| ||||| | Sbjct 27060 GATACCTTCCTTGTCTTGAATTTTC-GACTTAACGTTGTCGATGGTATCGGAAGATTCAA 27002 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | || || |||||||| || || || || || || ||||||||| Sbjct 27001 CTTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCATA 26952 Score = 102 bits (112), Expect = 5e-17 Identities = 162/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||||||||| | ||||||| || ||||| || ||||| |||||||| || || Sbjct 27864 ACCACCTCTCAATCTCAACACCAGGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGA 27805 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | || | | || || | ||| || || ||||||||||| | ||| ||||| | || Sbjct 27804 CAAGGTTCTACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGG 27745 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||||||||| || |||||| ||| || | ||| | |||||| ||||| | Sbjct 27744 GATACCTTCTTTATCTTGAATTTT-ACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAA 27686 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | || || || || ||||||| ||||| || || || |||||| Sbjct 27685 CCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCATA 27636 >seq13 Length=186795 Score = 93.3 bits (102), Expect = 3e-14 Identities = 160/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580 ||||||||||||| | || ||||| |||||||| || ||||| |||||||| |||| Sbjct 178080 CACCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGG 178139 Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640 | | || | | || |||||||| || || ||||| ||||| | || || || | | Sbjct 178140 ACAAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTG 178199 Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699 | | |||||| ||||| || || | | |||| ||| | ||||| ||||| Sbjct 178200 GAATACCTTCCTTGTCTTGGATCTT-GGACTTGACATTGTCAATAGTGTCAGAAGATTCA 178258 Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || || | || || || ||||| ||||| || || || || || ||||| Sbjct 178259 ACTTCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCAT 178308 >seq4 Length=409361 Score = 93.3 bits (102), Expect = 3e-14 Identities = 154/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||||||||| | || || || || | |||| |||||||| |||||||| || || Sbjct 365004 ACCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGA 365063 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | || | |||| |||||||| || || ||||| ||||| | || || || | || Sbjct 365064 CAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 365123 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | |||||| ||||| ||| || || | |||| ||| | ||||| ||||| | Sbjct 365124 GATACCTTCCTTGTCTTGAATCTT-TGACTTGACATTGTCAATAGTGTCAGAAGATTCAA 365182 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAA 33740 | || | ||||| || ||||| || || || || ||||| Sbjct 365183 CTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAA 365222 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328702141178880