Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178395.1_202017-04- 21] 2,388 sequences; 12,002,900 total letters Query= NC_023615.1 Length=196456 Score E Sequences producing significant alignments: (Bits) Value seq1 107 2e-18 >seq1 Length=482764 Score = 107 bits (118), Expect = 2e-18 Identities = 208/302 (69%), Gaps = 4/302 (1%) Strand=Plus/Plus Query 171666 AGGTGTTAAAGTTTGGAATGATAATGGTTCTCGTGAATTTTTAGATTT-ATGCGGGTTTA 171724 ||||||||| ||||| | | |||||| |||||||||| ||||||| ||| ||||| | Sbjct 49757 AGGTGTTAAGATTTGGGACGGTAATGGATCTCGTGAATATTTAGATAAGATG-GGGTTCA 49815 Query 171725 CTGAAAGAAAAGAAGGTGATTTAGGTCCAATTTATGGATTTCAATGGAGACATGCAGGGG 171784 || || |||| ||| ||| | || || ||||||||||||||||||| ||| || | Sbjct 49816 AAGATAGGAAAGTAGGAGATCTGGGGCCCGTTTATGGATTTCAATGGAGGCATTTTGGTG 49875 Query 171785 CTCAATATATCGAC-TGTTATACAGATTACACAGGACAAGGAGTGGACCAATTAAGTCAA 171843 || |||| | ||| || || || || || |||||||| | || ||||| | || Sbjct 49876 CTAAATACA-AGACGTGCGATGACGACTATACTGGACAAGGTATTGATCAATTGAAACAG 49934 Query 171844 ACTATTAATACTTTACAAAACAACCCAGAAAGTAGAAGGATGTTAATTGATAGTTGGAAT 171903 |||| ||| || | | || || | |||||| || | || | ||||| Sbjct 49935 GTTATTCATAAACTAAAGACAAATCCCTACGATAGAAGAATCATTATGAGTGCCTGGAAC 49994 Query 171904 GTACCTCAACTTGATAAAATGGTTCTTCCTCCTTGCCACACTTTAGCACAATTTTATGTC 171963 | || | |||| ||||||| | | || || ||||| | ||| |||| || |||||| Sbjct 49995 CCAGCTGATTTTGACAAAATGGCTTTGCCACCATGCCATATTTTTTCACAGTTCTATGTC 50054 Query 171964 AG 171965 || Sbjct 50055 AG 50056 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628512438343680