Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178395.1_202017-04-
21] 2,388 sequences; 12,002,900 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq385 150 1e-31
seq8 109 4e-19
seq485 95.1 9e-15
seq420 93.3 3e-14
seq558 87.8 1e-12
>seq385
Length=63491
Score = 150 bits (166), Expect = 1e-31
Identities = 178/236 (75%), Gaps = 4/236 (2%)
Strand=Plus/Minus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| ||| || ||||||| ||||||||||| |||||| || |||||||||||||||||
Sbjct 32825 TTGCATACCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTA 32766
Query 44164 ATCGG-CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGAT 44222
|| | | || | | |||| || |||||||| |||||||||||||| | ||| ||||
Sbjct 32765 GTCAGACAAGGTTCTAC-CGTCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGAT 32707
Query 44223 CTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCG 44281
||| ||| | ||||||||| ||| || ||| ||| || ||| | || ||||||| |
Sbjct 32706 CTGGAGGGATACCTTCCTTGTCCTGGATTTTCGACTT-AACGTTATCGATCGTGTCGGAG 32648
Query 44282 GATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||| ||||| | || || || || || || | ||||| || ||||| |||||
Sbjct 32647 GATTCAACCTCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 32592
Score = 118 bits (130), Expect = 8e-22
Identities = 172/237 (73%), Gaps = 6/237 (3%)
Strand=Plus/Minus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| ||| || ||||||| ||||||||||| |||||| || |||||||||||||||||
Sbjct 33053 TTGCATACCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTA 32994
Query 44164 ATC-GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGAT 44222
|| | | || | | | || || || ||||| || ||||| ||||| | ||| ||||
Sbjct 32993 GTCAGACAAGGT-TCTACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGAT 32935
Query 44223 CTGAAGGCACACCTTCCTTTTCCGTTATCTT-CTGCTTCAATGTT-CCTATGGTGTCGGC 44280
| | ||| | |||||| || || ||||| || || | ||| | || |||||||
Sbjct 32934 CCGGAGGGATACCTTCTTTATCTTGAATCTTACT--TTTGACGTTGTCAATAGTGTCGGA 32877
Query 44281 GGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||| ||||| | || || ||||| || || || ||||| || || ||||||||
Sbjct 32876 AGATTCAACCTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 32820
Score = 114 bits (126), Expect = 9e-21
Identities = 168/235 (71%), Gaps = 2/235 (1%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || ||||| || || | ||| || || | ||| |||||| || |||||||||||
Sbjct 32594 CATACCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATC 32535
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
| || | |||| || |||||||| |||||||||||||| | || |||||||
Sbjct 32534 AGACAGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGG 32475
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGATT 44285
||| | ||||||||| || || ||| ||| || ||| | ||||| |||| ||||
Sbjct 32474 AGGGATACCTTCCTTGTCTTGAATTTTCGACTT-AACGTTGTCGATGGTATCGGAAGATT 32416
Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGAT 44340
| || |||| || || || || || || | ||||| ||||| || ||||| ||
Sbjct 32415 CAACTTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCATAAT 32361
>seq8
Length=256907
Score = 109 bits (120), Expect = 4e-19
Identities = 165/231 (71%), Gaps = 8/231 (3%)
Strand=Plus/Plus
Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170
|| ||||||| |||||| |||| ||| || || ||||||||||||||||| ||||
Sbjct 247411 CCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 247470
Query 44171 A--GTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228
| ||| | | || |||| ||||| || ||||||||||| | || || || | |
Sbjct 247471 AAAGTT--CTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTG 247528
Query 44229 GCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTC 44286
| | ||||||||| || ||||| ||| || ||| | || ||||| | |||||
Sbjct 247529 GAATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGT--CAATAGTGTCAGAAGATTC 247586
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| |||| ||||| ||||| || || | ||||| ||||| ||||||||
Sbjct 247587 AACTTCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCAT 247637
>seq485
Length=80715
Score = 95.1 bits (104), Expect = 9e-15
Identities = 159/226 (70%), Gaps = 8/226 (4%)
Strand=Plus/Minus
Query 44108 ATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCG 44167
|| || ||||| | |||||| |||| || | ||| ||||||||||||||||| ||
Sbjct 17571 ATACCACCTCTTAATCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCA 17512
Query 44168 GC--GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTG 44225
| ||||| | |||| |||| ||||| || ||||||||||| | || || || |
Sbjct 17511 GATAGAGTT--CTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAG 17454
Query 44226 AAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGA 44283
|| | ||||||||| || ||||| ||| || ||| | |||||||| | ||
Sbjct 17453 GTGGGATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGT--CAATGGTGTCAGAAGA 17396
Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAG 44329
||| || |||| || || ||||| || || | ||||| ||||||
Sbjct 17395 TTCAACTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTAACGAAG 17350
>seq420
Length=148
Score = 93.3 bits (102), Expect = 3e-14
Identities = 96/123 (78%), Gaps = 2/123 (2%)
Strand=Plus/Minus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| ||| || ||||||| ||||||||||| |||||| || |||||||||||||||||
Sbjct 124 TTGCATACCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTA 65
Query 44164 ATC-GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGAT 44222
|| | | || | | |||| || |||||||| |||||||||||||| | || ||||
Sbjct 64 GTCAGACAAGGT-TCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGAT 6
Query 44223 CTG 44225
|||
Sbjct 5 CTG 3
>seq558
Length=226
Score = 87.8 bits (96), Expect = 1e-12
Identities = 104/141 (74%), Gaps = 0/141 (0%)
Strand=Plus/Minus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| ||| || ||||||| ||||||||||| || | ||| ||| || || ||||| ||
Sbjct 202 TTGCATACCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATA 143
Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223
||| | || | |||| ||||| ||||| |||||||| ||||| | || |||||
Sbjct 142 ATCAGACAGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATC 83
Query 44224 TGAAGGCACACCTTCCTTTTC 44244
|| ||| | ||||||||| ||
Sbjct 82 TGGAGGAATACCTTCCTTGTC 62
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359979922929396
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |