Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178405.1_202017-04-
21] 759 sequences; 11,795,039 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq554 331 1e-85
seq2 199 5e-46
>seq554
Length=341995
Score = 331 bits (366), Expect = 1e-85
Identities = 1327/2074 (64%), Gaps = 49/2074 (2%)
Strand=Plus/Plus
Query 52804 CAAT-GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTT 52862
|||| || |||||||| | ||| ||||| | || || | | ||||||||| || || |
Sbjct 62180 CAATAGTAAATTGAATTGCAGCAGATGCAGCTTGGGTTCTCAAATAGTACATACCGGTCT 62239
Query 52863 TTAGACCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTCGGATCTG 52922
| | || ||||||||||||||||||||||||||||||| | | || |
Sbjct 62240 TCAATCCCTTCTTCCATCCGTAAAAATGCATACTTGTTAGTTTACCCATAGTTGGGGCAC 62299
Query 52923 CTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTT 52982
|| | ||||| ||| ||| |||||| || || | | || || ||||| |
Sbjct 62300 GTAAGAACAAATTCAAAGAATGAGATTGATCAATATAGACAGAACGATCGGCTGCCATGT 62359
Query 52983 TTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCT 53041
| ||||| |||||||||| ||||||||||| ||| || || || || | ||| |||| |
Sbjct 62360 TAATGATAGTCTTTTGTGAAATTTCCCAAACAGTCTTGTATAAGTCCTTCAAT-TCTTGT 62418
Query 53042 GGAAGGTTTG-TATTC--TGAATAGATCCACCATCTACCATAATCCTATTCT---TGATC 53095
|||| |||| || | ||||| || ||| | | ||||| || || | ||
Sbjct 62419 GGAACATTTGGTAAGCCTTGAATGGAGCCATTTTGTG---TAATCAGATACTGTTTCATA 62475
Query 53096 TCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGA 53155
| |||| ||| | | || || | | || | | || || || || ||
Sbjct 62476 CCCTCATCCCAAATACCTAAATCAACCAAGTCACGCAGTAAGTAAGGGTTCACAACCTGG 62535
Query 53156 AATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCA 53215
||||| || || || || | || | ||| ||||| || ||||| | | | |||
Sbjct 62536 AATTCACCGGATAAGACACGACGGGAGTACATATTGGAAGTGACTGGTTCGAAACATTCA 62595
Query 53216 TTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTT 53275
|||| ||||| ||||| | || |||||||| ||||| ||||||| || ||||
Sbjct 62596 TTATAACCCAATATTTGGGATGTGGATGCAGTAGGCATTGGTGCCATGGTCAAGGAATTT 62655
Query 53276 CTAAGACCGTATGTTCTGATTTTATCTTTTAG--AGGT-TCCCAATTCCAAAGATCCGAC 53332
|||| ||| ||| | | || |||||||| |||| ||||||| ||| | | |
Sbjct 62656 CTAATACC--ATGCT-TCATGATATCTTTTCTTAAGGTGTCCCAATCCCACATGCCGTAG 62712
Query 53333 GGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATAT 53392
||| ||||| ||||| | | || |||||| |
Sbjct 62713 GGTTTTTGGTCCCACATATCAAACTGTAGTATACCTTGAGAAGCAGGAGATCCTTGGAAA 62772
Query 53393 GTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAA 53452
|| |||||||| || ||||||| ||||||||||||| || || | | | | ||||
Sbjct 62773 GTTTCGTATGGACCGTCCTTCTGAGCTAGTTCACAAGAAGCTTCCATGGAGGCATGATAA 62832
Query 53453 ATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTT 53512
|| ||||| ||||| | ||||||| | |||||| ||||||||| || |
Sbjct 62833 ATAGTTTCAAAGATTTGGATATTTAGTAAACGGGCTTCCTCAGAATCAAATGGCAAACGT 62892
Query 53513 AAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTA 53572
|| || || || | ||| || | ||||||||||| | | | || |||||||||||| ||
Sbjct 62893 AACAGCATGAAAGTGTCAGCGAGACCTTGAACACCCAAAGCAATTGGTCTATGTCTCATA 62952
Query 53573 TTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGGTTT 53632
|| || || |||||| || ||| || |||||| ||| || | | | || | ||
Sbjct 62953 TTGGATTTTCTCGCTTCTTCAACAGGGTAGTAATTACGATCAATGACTCTGTTTAAATTA 63012
Query 53633 CTGACAATTACTTTGACCACATCCT-TCAGTTTGAGAAAATCAAATTGTCCATCTATTAC 53691
| || ||||| | | || | | | ||| ||| | | ||| | | ||||
Sbjct 63013 CGAGTAACAACTTTAGCAATTTCATGTAATTTTTTGAAGTTGTA--TGTGGAAGTCTTAC 63070
Query 53692 AAACATG------TTCAATG-------------CAATAGATGCCAGATTACAAACGGCTA 53732
| | | ||||||| ||| || |||| |||||||| ||
Sbjct 63071 CATCCTCAGAAGTTTCAATGAATGCTGGTAAGGCAACGGAAGCCAAGTTACAAACAGCAG 63130
Query 53733 CCTCATTAGCATCCGCATATTGTATTATCTCAGTGCA-AAGATTACTACACTTGATGGTT 53791
|||| | | | | |||| | || ||| ||| ||| || | ||||||||
Sbjct 63131 TTTCATCTGGAGCTGAGTATTCAACAATTTCACAGCATAAGTTTGATG-ACTTGATGACA 63189
Query 53792 CCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTA 53851
||||| |||| ||||||| ||| ||||||| |||||||| |||| || ||| || |||
Sbjct 63190 CCTAAGTTTTTTTGATTAGATTTTCTGTTACAAGCATCCTTGTAAACAACGAAAGGTGTA 63249
Query 53852 CCAGTTTCAATCTGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTTTATTATAGAT 53911
||||||||| | || | ||| | ||| | | ||| | | || || || ||
Sbjct 63250 CCAGTTTCAGTTTGAGCTTCCAAAATGGAATACCATAATTTTTGGGCTTTGAT---AGTC 63306
Query 53912 TTGTATCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCAAACTCGTCTCCCCAAACA 53971
|| | |||| | ||||| | ||||| | ||||||||||| || || |
Sbjct 63307 TTACCACGACCTTCTTTCTCGTAGCGGGTATATAGAGCCTCAAACTCGTCACCGTAACAA 63366
Query 53972 TTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACT 54031
| | || |||||| | ||| | | || | ||| || | || | ||
Sbjct 63367 TCGCTTAAACCAGGAGCTGATGTTGGAGAGAATAATGTCCAGGTCCCATTTTCTTCGACA 63426
Query 54032 CGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCC 54091
|| ||||| || |||||||||||||| ||||| || | |||||| | | | ||||
Sbjct 63427 CGCTTCATGAAAAGATCAGGAATCCATAGAGCAGGGAACAAATCTCTTGCACGAATTTCC 63486
Query 54092 TCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCC 54151
|| || || ||||| ||| ||| | || | | ||||||| |||||| ||||||
Sbjct 63487 TCTTTACCGTGGTTCTTCCTAATATCAATAAAATCAAATATATCAGCATGCCATGGTTCC 63546
Query 54152 AAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTG 54211
| ||| | || | | ||||| | ||| || || ||||| || | || | || |||
Sbjct 63547 AGGTAAAGGGCAAACGCACCAGGTCTTTTATTACCACCCTGGTCAACATAACGGGCAGTG 63606
Query 54212 TTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATA 54271
||||| |||| | | ||| ||||| | ||| || || | ||| || || || | ||
Sbjct 63607 TTATTGAAAACACGAATCATAGGAATTAAACCGTTAGAAGTACCGTTTGTACCAGCAATG 63666
Query 54272 TAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAG 54331
|| ||| | | |||||| ||| || |||||| || || || || |||| ||
Sbjct 63667 TAAGAACCAGTTGAACGAATGTTATGGATATGTAGACCAATACCACCAGCAGTTTTGGAA 63726
Query 54332 ATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTA 54391
|| || || ||| || || || || || || ||||| ||| || ||| ||||| |
Sbjct 63727 ATCAAAGCACATTCCTTCAAGGTGTCGTAAATCCCCTCGATAGAGTCCTCCTTCATGGCA 63786
Query 54392 AGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAA 54451
| | ||||| |||||||| | ||| || ||||| || || || |||||
Sbjct 63787 ACCAAGAAACAAGAGGACATTTGAGGTTTTGGAGTACCGGCATTGAACAACGTTGGAGAG 63846
Query 54452 GCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATATCC 54511
|| || ||||| ||||| ||| | | || ||||| || | ||| | || |||||
Sbjct 63847 GCATGAGTAAAATATTTTAGAGACATCAAGTTATACGTTTCTAAAGCAGCCTCGATATCT 63906
Query 54512 CATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTG 54571
| || || |||| |||||| | ||| | | || || || | ||| | | ||||
Sbjct 63907 CTACCGTGGATGCCTAGTGCGACTCTCATAATTAAATGTTGTGGACGTTCGGCCA-CTTG 63965
Query 54572 -TTGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA-TG 54629
||| ||| | || || || || |||||||||||||||||||||||| |||| ||
Sbjct 63966 ACCGTTGATTCTTAGTAAATAAGAACGTTCCAAAGTTTTAAAACCAAAATAACTGTACTG 64025
Query 54630 AAAAGTCTCGTTCGTAAATAATAACTGAGTTGAGTTTATCCTTATATTTGTTAACTACAT 54689
|||| |||| || || | ||| | ||||| | ||||||||| | || | || | ||
Sbjct 64026 AAAA-TCTCTGTCATAGACAATTGCGGAGTTCAATTTATCCTTGTTTTCCATGACAATAT 64084
Query 54690 CCATGGTAATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGTTAA 54749
| | | || || || |||| | || ||| | || |||||| || ||
Sbjct 64085 TGTAGACATCATCAGAGATCATGGGAGCGGGCTTACCAGTAGCAGCATTGACGTATCTAT 64144
Query 54750 ATAAATCCTTCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGG 54809
| | ||| | | || | | |||| ||||| | |||| ||| |||| ||| || | ||
Sbjct 64145 AAAGATCTTCGACAACCTTAGAAAATTGTTTTGTGGTTTGTTTATGTAAATTAGAAATGG 64204
Query 54810 CTATTCTAGCGGCTAGAATGGCATAATCCGGATG 54843
| ||||| || ||||| |||| ||||| |||||
Sbjct 64205 CAATTCTGGCCGCTAGGGTGGCGTAATCTGGATG 64238
>seq2
Length=614795
Score = 199 bits (220), Expect = 5e-46
Identities = 590/900 (66%), Gaps = 15/900 (2%)
Strand=Plus/Plus
Query 23824 CTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTT 23883
|||| |||||||| || |||||||| ||| || | |||||||| || ||||| |
Sbjct 425677 CTTG-GACATAACACCAGCCTTTTGGTAGTCAGAAACTCTCTTTTCGAAGAAGTTAGTCT 425735
Query 23884 TACCTTCTAATGATATATTTTCCATGAAATCGGATGGATTGGTAACATTATAGA--TTCT 23941
|||| | || || || ||||||||||||||| | || || || || ||| ||||
Sbjct 425736 TACCGGCCAAGGAGATGTTTTCCATGAAATCGAAGGGGTTTTCGACCTTGTAGTATTTCT 425795
Query 23942 TTTAAATCCCAATTCAGAAATCAATCTATCTGCGACAAACTCCATATATGTTTTCATCAT 24001
| | | || || | | || ||| || ||||| ||||| | ||| |||||||
Sbjct 425796 TGTTA--CCGAAAGCGACCAACAGTCTGTCGGCGACGAACTCAACGTATTGGTTCATCAA 425853
Query 24002 TTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAAT-TCTT-GTTCA 24059
||| ||||| |||| | |||||| | || | ||||| | |||| |||||
Sbjct 425854 GTCAGCGTTCATACCTAGCAAAGCAACTGGTAAGGCGTCC--AAGAAGTATCTTTGTTCA 425911
Query 24060 ATAGAGACCGCGTCTGTTATAATAGATCTTACTGTTTCTTCACTCGGTGGATACAATAAA 24119
|| || || || || | ||| | || | || ||| | | |||
Sbjct 425912 ATTTCCACAGCCTCGGTGACAATTTTTTCAACAATGGCTGGGTCTGGTTTGTTCTTCAAA 425971
Query 24120 TGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCG 24179
|| |||| ||| ||||| || ||| ||| | ||| |||||||||| || ||||||
Sbjct 425972 TGGGCGAACAACAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATTCG 426031
Query 24180 TTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAAT 24239
|||||||| || | |||||||| | || | |||||| | ||| || ||||| |||||
Sbjct 426032 TTGGAAAAGGTTAAACCGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAAAG 426091
Query 24240 GATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCG 24299
|| || || || || | ||||| | | |||||||||| |||||||| ||| | |
Sbjct 426092 GAACCGGAGAAAAAGACACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCAAACAAG 426151
Query 24300 GCG---CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATT 24356
||| ||| || ||||| || |||||| |||||||||| | || ||
Sbjct 426152 GCGTCAGCGTCTTGAATCCATCTTAAAGCCCATTCGGCCTTCTCACCGATTTCTGGGATG 426211
Query 24357 GTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATC 24416
|| | || ||||| || | | | |||| ||| || || | || ||||| |||
Sbjct 426212 GTGTGAATGGCATTGAACAAGAATTCACTTTCTTTAGGGTCCTTGATGTAGGTATCGATC 426271
Query 24417 AAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACAT 24476
|| | || |||| || ||||| |||||||| ||||| || ||||||||||
Sbjct 426272 AACAAGGAGTAAGTTTCAGAGTGAATATTTTCAATCATGATTTGGAAACCGTAGAAACTC 426331
Query 24477 CTAGCCTCGGTAATCTGTACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATT 24536
| ||||| | ||| || ||||| | | || ||| | || |||||||| || ||
Sbjct 426332 TTTGCCTCTGGAATTTGGACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACAATA 426391
Query 24537 CCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCG-TCTGGT-- 24593
|||||| || || ||||| || | || || ||| || | ||| ||| ||
Sbjct 426392 CCGTCAGAAGCGGCGAAAAAGGCAAGAACTCTGGAAATGAAAAATCTCTCGTTCTCGTTC 426451
Query 24594 GTTAGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAAT 24653
|| || ||||| |||| |||||| ||||| | ||| | |||||| | ||||| ||
Sbjct 426452 ATTCTGTTGTTCCAGTCATGGATATCCTTAGACAAATCAATTTCTTCAGCGGTCCAGAAA 426511
Query 24654 GATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACA 24713
|| || || || || || | |||||| ||||| || | || || |||| ||||
Sbjct 426512 GAAGCTTCGGCACGCTTGTAGGCTTGCCAGATTTCATGGTACTTGATAGGGAAAAGAACA 426571
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593715967066320
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