Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178405.1_202017-04-
21] 759 sequences; 11,795,039 total letters
Query= NC_005038.1
Length=99657
Score E
Sequences producing significant alignments: (Bits) Value
seq19 91.5 9e-14
seq536 86.0 4e-12
seq6 82.4 5e-11
>seq19
Length=72988
Score = 91.5 bits (100), Expect = 9e-14
Identities = 162/233 (70%), Gaps = 10/233 (4%)
Strand=Plus/Minus
Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201
||| ||||| || | ||||||||||||||| || |||||||| || || || ||||||||
Sbjct 27980 ACCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGA 27921
Query 33202 CAAATTGAGTT----GGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCG 33257
|| | ||| ||| |||| |||||| || ||| || || | ||| || || |
Sbjct 27920 CA----GCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAGATCAATCTTTGTTGATCTG 27865
Query 33258 TGGGTATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTT-TGAATCGTGTCGTTGGGT 33316
|| || ||||| || || ||| || ||| ||| | ||| ||||| | |
Sbjct 27864 GAGGAATACCTTCCTTGTCTTGAAT-TTTTGACTTAACGTTGTCAATAGTGTCAGAAGAT 27806
Query 33317 TGAACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369
| ||| || || ||||| || || || || || || || || |||||||||||
Sbjct 27805 TCAACCTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 27753
Score = 91.5 bits (100), Expect = 9e-14
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201
||| ||||| || | |||||||| || | || || || ||||| || ||||| |||||
Sbjct 28208 ACCACCTCTCAATCTCAACACCAGGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGA 28149
Query 33202 CAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGG 33261
||| | || || | |||||| ||| ||| || || | || || |||| ||
Sbjct 28148 CAAGGTTCTACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGG 28089
Query 33262 TATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAAC 33321
|| |||||||| || ||| ||| || | | ||| |||||| | || |||
Sbjct 28088 GATACCTTCTTTATCTTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAAC 28029
Query 33322 GTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369
|| || ||||| || || || || |||||||| ||||||||||||||
Sbjct 28028 CTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 27981
>seq536
Length=66217
Score = 86.0 bits (94), Expect = 4e-12
Identities = 158/232 (68%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 33141 CACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAG 33200
|||| ||||| || | ||| ||||| || | || || || ||||| || ||||| || |
Sbjct 8723 CACCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGG 8664
Query 33201 ACAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGG 33260
||||| | || ||||||||||| ||| ||| || || | ||| ||||| | |
Sbjct 8663 ACAAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTG 8604
Query 33261 GTATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAA 33320
| || ||||| || || ||| || || | | ||| ||||| | || ||
Sbjct 8603 GAATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAA 8544
Query 33321 CGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCATGTT 33372
| ||||| || || || || || || | ||| || |||||||||||||| ||
Sbjct 8543 CTTCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 8492
>seq6
Length=300932
Score = 82.4 bits (90), Expect = 5e-11
Identities = 150/220 (68%), Gaps = 0/220 (0%)
Strand=Plus/Minus
Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201
||| ||||| || | ||| || || ||||| || || |||||||| || ||||| |||||
Sbjct 49359 ACCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGA 49300
Query 33202 CAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGG 33261
||| | ||| ||||||||||| ||| ||| || || | ||| ||||| | ||
Sbjct 49299 CAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 49240
Query 33262 TATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAAC 33321
|| ||||| || || |||| || || | | ||| ||||| | || |||
Sbjct 49239 GATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 49180
Query 33322 GTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAA 33361
|||| ||| || || || || || | ||| || || |||
Sbjct 49179 TTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAAA 49140
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 318774651207582
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |