Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178405.1_202017-04-
21] 759 sequences; 11,795,039 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq536 122 2e-22
seq6 120 7e-22
seq19 102 2e-16
seq35 98.7 2e-15
>seq536
Length=66217
Score = 122 bits (134), Expect = 2e-22
Identities = 142/192 (74%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253
|| || || || || || ||||||| ||| ||||||||| | || || |||
Sbjct 8519 ACCGGTAAGACTATTACCCTGGAAGTTGAATCTTCTGACACTATTGACAATGTCAAGTCC 8578
Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313
||||| ||||| || ||||| ||| || ||| |||||| | ||||| || || |||
Sbjct 8579 AAGATCCAAGACAAGGAAGGTATTCCACCTGACCAACAAAGATTGATCTTTGCTGGTAAG 8638
Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373
|| ||||||||||| || |||||| |||| |||||| |||| || || |||||||| |||
Sbjct 8639 CAATTGGAAGATGGTAGAACTTTGTCCGACTACAACATCCAAAAGGAATCTACTCTACAC 8698
Query 206374 CTTGTTTTGAGA 206385
| || ||||||
Sbjct 8699 TTGGTCTTGAGA 8710
>seq6
Length=300932
Score = 120 bits (132), Expect = 7e-22
Identities = 152/208 (73%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 206179 TTTTG-CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGT 206237
||||| ||| || | || || || || |||||||||||||| ||| ||||||||| |
Sbjct 49140 TTTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTAT 49199
Query 206238 CGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACT 206297
|| || ||| |||||||||||| || ||||| || || ||| |||||| |
Sbjct 49200 TGACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATT 49259
Query 206298 TATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAA 206357
||||| || || ||||| |||||||| || || || ||| | || |||||| | || ||
Sbjct 49260 GATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAAA 49319
Query 206358 AGAGTCTACTCTTCACCTTGTTTTGAGA 206385
||| || ||| | ||| | || ||||||
Sbjct 49320 AGAATCCACTTTGCACTTAGTCTTGAGA 49347
>seq19
Length=72988
Score = 102 bits (112), Expect = 2e-16
Identities = 148/208 (71%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 206179 TTTTG-CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGT 206237
||||| ||| || || ||||| || || || || | || || ||| ||||||||| |
Sbjct 27761 TTTTGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCTGACACTAT 27820
Query 206238 CGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACT 206297
|| || ||| ||| |||||||| || ||||| ||| || || |||||| |
Sbjct 27821 TGACAACGTTAAGTCAAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCAACAAAGATT 27880
Query 206298 TATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAA 206357
||||| ||||| ||||| ||||||| || || || || | ||||| ||| | |||||
Sbjct 27881 GATCTTTGCCGGTAAGCAACTGGAAGACGGTAGAACGCTGTCTGATTATAACATTCAGAA 27940
Query 206358 AGAGTCTACTCTTCACCTTGTTTTGAGA 206385
||||||||| | || | || ||||||
Sbjct 27941 AGAGTCTACGTTGCATTTGGTGTTGAGA 27968
Score = 102 bits (112), Expect = 2e-16
Identities = 146/204 (72%), Gaps = 4/204 (2%)
Strand=Plus/Plus
Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243
|||||| || ||||| || || || || | || || ||| ||| ||||| | ||
Sbjct 27995 CAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCCGACACTATTGACAA 28054
Query 206244 AGT--AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATC 206301
|| |||| |||| ||||||| |||||||| || ||||| || ||| | ||
Sbjct 28055 CGTCAAAAGTAAAA--TTCAAGATAAAGAAGGTATCCCTCCGGATCAACAGAGATTGATT 28112
Query 206302 TTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAG 206361
|| || || ||||| | |||||||| || || ||| | || |||||| |||| || ||
Sbjct 28113 TTTGCTGGTAAGCAACTAGAAGATGGTAGAACCTTGTCTGACTACAACATCCAAAAGGAA 28172
Query 206362 TCTACTCTTCACCTTGTTTTGAGA 206385
|||||||||||||| || ||||||
Sbjct 28173 TCTACTCTTCACCTGGTGTTGAGA 28196
Score = 102 bits (112), Expect = 2e-16
Identities = 143/201 (71%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243
||| || || ||||| || || || || | || || ||| ||||||||| | ||
Sbjct 28223 CAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCTGACACTATTGACAA 28282
Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303
|| ||| ||| |||||||| || ||||| ||| || ||| |||||| | |||||
Sbjct 28283 CGTTAAGTCAAAAATTCAAGACAAGGAAGGTATTCCTCCAGACCAGCAAAGATTGATCTT 28342
Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363
||||| || || | |||||||| || || || | || ||||| | || || |||||
Sbjct 28343 TGCCGGTAAACAACTAGAAGATGGTAGAACGCTGTCGGACTACAATATTCAAAAGGAGTC 28402
Query 206364 TACTCTTCACCTTGTTTTGAG 206384
||||||||||| || |||||
Sbjct 28403 CACTCTTCACCTCGTCTTGAG 28423
Score = 91.5 bits (100), Expect = 3e-13
Identities = 148/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| || || | || || ||||| |||||||| || || ||| || |||
Sbjct 27528 CAGATCTTTGTTAAGACTTTGACCGGTAAAACCATCACTTTAGAGGTTGAATCCTCCGAC 27587
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| |||| || ||| || || || || || ||||| || || || ||
Sbjct 27588 ACGATCGATAACGTTAAGTCGAAAATCCAGGACAAGGAAGGTATCCCTCCAGATCAACAG 27647
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
|| | ||||| ||||| |||||| | ||||| || || || ||| | || |||||| ||
Sbjct 27648 AGGTTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACCTTGTCTGACTACAACATC 27707
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 206385
|| || || |||||||||||| | || ||||||
Sbjct 27708 CAAAAGGAATCTACTCTTCACTTGGTGTTGAGA 27740
Score = 86.0 bits (94), Expect = 1e-11
Identities = 79/100 (79%), Gaps = 0/100 (0%)
Strand=Plus/Minus
Query 204757 TCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCC 204816
|||||| || | |||||||||||| || || |||| || ||||||| ||| || || ||
Sbjct 27740 TCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACC 27681
Query 204817 ATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856
||||| |||||||| ||||| ||||| | || ||||||
Sbjct 27680 GTCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGA 27641
>seq35
Length=15292
Score = 98.7 bits (108), Expect = 2e-15
Identities = 137/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253
|| || || || |||||||||||||| ||| ||||||||| | || || |||
Sbjct 802 ACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACCATTGACAATGTCAAGTCC 743
Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313
||||| ||||| || ||||| || || ||| |||||| | ||||| || || |||
Sbjct 742 AAGATCCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTGATCTTTGCTGGTAAG 683
Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373
|| |||||||| || || ||| | | || |||||| |||| || || || ||| | ||
Sbjct 682 CAATTGGAAGACGGTAGAACTCTATCTGACTACAACATCCAAAAGGAATCCACTTTACAT 623
Query 206374 CTTGTTTTGAGA 206385
| || ||||||
Sbjct 622 TTGGTCTTGAGA 611
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181809307162039
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |