Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178405.1_202017-04- 21] 759 sequences; 11,795,039 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq19 150 1e-31 seq536 109 4e-19 seq35 95.1 9e-15 >seq19 Length=72988 Score = 150 bits (166), Expect = 1e-31 Identities = 178/236 (75%), Gaps = 4/236 (2%) Strand=Plus/Minus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || ||||||| ||||||||||| |||||| || ||||||||||||||||| Sbjct 27758 TTGCATACCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTA 27699 Query 44164 ATCGG-CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGAT 44222 || | | || | | |||| || |||||||| |||||||||||||| | ||| |||| Sbjct 27698 GTCAGACAAGGTTCTAC-CGTCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGAT 27640 Query 44223 CTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCG 44281 ||| ||| | ||||||||| ||| || ||| ||| || ||| | || ||||||| | Sbjct 27639 CTGGAGGGATACCTTCCTTGTCCTGGATTTTCGACTT-AACGTTATCGATCGTGTCGGAG 27581 Query 44282 GATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||| ||||| | || || || || || || | ||||| || ||||| ||||| Sbjct 27580 GATTCAACCTCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 27525 Score = 120 bits (132), Expect = 2e-22 Identities = 169/235 (72%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || ||||||| ||||||||||| || | ||| ||| || || ||||| || Sbjct 27986 TTGCATACCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATA 27927 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 ||| | || | |||| ||||| ||||| |||||||||||||| | || ||||| Sbjct 27926 ATCAGACAGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAGATCAATCTTTGTTGATC 27867 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGG 44282 || ||| | ||||||||| | | | | || || | || ||| | || ||||| | | Sbjct 27866 TGGAGGAATACCTTCCTTGT-CTTGAATTTTTGACTTAACGTTGTCAATAGTGTCAGAAG 27808 Query 44283 ATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||| ||||| | || || ||||| || || || ||||| || || |||||||| Sbjct 27807 ATTCAACCTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 27753 Score = 118 bits (130), Expect = 8e-22 Identities = 172/237 (73%), Gaps = 6/237 (3%) Strand=Plus/Minus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || ||||||| |||||||||||||||||| || ||||||||||||||||| Sbjct 28214 TTGCATACCACCTCTCAATCTCAACACCAGGTGAAGAGTAGATTCCTTTTGGATGTTGTA 28155 Query 44164 ATC-GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGAT 44222 || | | || | | | || || || ||||| || ||||| ||||| | ||| |||| Sbjct 28154 GTCAGACAAGGT-TCTACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGAT 28096 Query 44223 CTGAAGGCACACCTTCCTTTTCCGTTATCTT-CTGCTTCAATGTT-CCTATGGTGTCGGC 44280 | | ||| | |||||| || || || || || || | ||| | || ||||||| Sbjct 28095 CCGGAGGGATACCTTCTTTATCTTGAATTTTACT--TTTGACGTTGTCAATAGTGTCGGA 28038 Query 44281 GGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||| ||||| | || || ||||| || || || || || ||||| |||||||| Sbjct 28037 AGATTCAACCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 27981 Score = 114 bits (126), Expect = 9e-21 Identities = 168/235 (71%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || ||||| || || | ||| || || | ||| |||||| || ||||||||||| Sbjct 27527 CATACCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATC 27468 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | || | |||| || |||||||| |||||||||||||| | || ||||||| Sbjct 27467 AGACAGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGG 27408 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGATT 44285 ||| | ||||||||| || || ||| ||| || ||| | ||||| |||| |||| Sbjct 27407 AGGGATACCTTCCTTGTCTTGAATTTTCGACTT-AACGTTGTCGATGGTATCGGAAGATT 27349 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGAT 44340 | || |||| || || || || || || | ||||| ||||| || ||||| || Sbjct 27348 CAACTTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCATAAT 27294 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || || |||| ||||| || |||||||| ||| ||||||||| || ||||| || | Sbjct 28435 CCACCCCTCAACCTCAAGACGAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGAC 28376 Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230 || | | || || || || || |||||||||||||| | ||||| |||| ||| Sbjct 28375 AGCGTTCTACCATCTTCTAGTTGTTTACCGGCAAAGATCAATCTTTGCTGGTCTGGAGGA 28316 Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGATTCCAC 44289 | ||||||||| | | | | || || | || ||| | || ||||| | ||||| || Sbjct 28315 ATACCTTCCTTGT-CTTGAATTTTTGACTTAACGTTGTCAATAGTGTCAGAAGATTCAAC 28257 Query 44290 CTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||| | || || ||||| || || || ||||| ||||| |||||||| Sbjct 28256 CTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACGAAAATTTGCAT 28209 >seq536 Length=66217 Score = 109 bits (120), Expect = 4e-19 Identities = 165/231 (71%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || ||||||| |||||| |||| ||| || || ||||||||||||||||| |||| Sbjct 8721 CCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 8662 Query 44171 A--GTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228 | ||| | | || |||| ||||| || ||||||||||| | || || || | | Sbjct 8661 AAAGTT--CTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTG 8604 Query 44229 GCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTC 44286 | | ||||||||| || ||||| ||| || ||| | || ||||| | ||||| Sbjct 8603 GAATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGT--CAATAGTGTCAGAAGATTC 8546 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || |||| ||||| ||||| || || | ||||| ||||| |||||||| Sbjct 8545 AACTTCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCAT 8495 >seq35 Length=15292 Score = 95.1 bits (104), Expect = 9e-15 Identities = 159/226 (70%), Gaps = 8/226 (4%) Strand=Plus/Plus Query 44108 ATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCG 44167 || || ||||| | |||||| |||| || | ||| ||||||||||||||||| || Sbjct 597 ATACCACCTCTTAATCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCA 656 Query 44168 G--CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTG 44225 | ||||| | |||| |||| ||||| || ||||||||||| | || || || | Sbjct 657 GATAGAGTT--CTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAG 714 Query 44226 AAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGA 44283 || | ||||||||| || ||||| ||| || ||| | |||||||| | || Sbjct 715 GTGGGATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGT--CAATGGTGTCAGAAGA 772 Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAG 44329 ||| || |||| || || ||||| || || | ||||| |||||| Sbjct 773 TTCAACTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTAACGAAG 818 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359987069976303