Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178415.1_202017-04- 21] 924 sequences; 11,574,455 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq67 141 8e-29 seq781 134 1e-26 seq417 98.7 8e-16 seq910 84.2 2e-11 >seq67 Length=24591 Score = 141 bits (156), Expect = 8e-29 Identities = 170/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 |||||||||||||| || || |||||||||||||| || | || || ||||| ||| | Sbjct 8485 AAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTGGAAGTTGAATCT 8544 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | || || | ||| || |||| || || ||||||||||| ||||||||||| || Sbjct 8545 TCTGACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGAC 8604 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 |||||| | | || ||||| || || || || || ||| | || | ||||| ||| Sbjct 8605 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTAC 8664 Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||| ||||| ||||| || |||| || || ||| ||||| | || ||| Sbjct 8665 AACATCCAAAAGGAATCTACTCTACACTTGGTCTTGAGATTGAGAGGTGGT 8715 >seq781 Length=1603 Score = 134 bits (148), Expect = 1e-26 Identities = 152/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||| || || ||||| ||||||||||| | || | ||||| ||| | || Sbjct 1265 ATGCAGATTTTCGTCAAGACTTTGACCGGTAAAACCATAACATTGGAAGTTGAATCTTCC 1206 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | ||| | | || ||||||||||||||||| ||||| || || |||||| Sbjct 1205 GATACCATCGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATCCCTCCAGATCAA 1146 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||| | | || |||||||| || ||| |||| || | || | || ||||||||| Sbjct 1145 CAAAGATTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACGCTGTCTGATTACAAC 1086 Query 22399 ATTCAAAAAGAATCCACCATACAT 22422 ||||| || || |||||| ||||| Sbjct 1085 ATTCAGAAGGAGTCCACCTTACAT 1062 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || |||||||| ||||| ||||||||||| ||||| | || || ||| || || Sbjct 1037 ATGCAGATCTTTGTTAAGACTTTGACCGGTAAAACCATCACTTTAGAGGTTGAATCCTCC 978 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || | | || ||||| || |||||||| ||||| || || |||||| Sbjct 977 GACACGATCGATAACGTTAAGTCGAAAATCCAGGACAAGGAAGGTATCCCTCCAGATCAA 918 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | | || |||||||| || ||| |||| || | ||| | || || |||||| Sbjct 917 CAGAGGTTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACCTTGTCTGACTACAAC 858 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || ||||| ||||| || | || || || ||| ||||| | || ||| Sbjct 857 ATCCAAAAGGAATCTACTCTTCACTTGGTGTTGAGATTGAGAGGTGGT 810 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||| || |||||| |||| || || || | || || || || ||| | || Sbjct 581 ATGCAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCC 522 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | ||||| ||||||||||| || || ||||| || || |||||| Sbjct 521 GACACTATTGACAACGTCAAAAGTAAAATTCAAGATAAAGAAGGTATCCCTCCGGATCAA 462 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | | || ||||| || || || |||| ||| | ||| | || || |||||| Sbjct 461 CAGAGATTGATTTTTGCTGGTAAGCAACTAGAAGATGGTAGAACCTTGTCTGACTACAAC 402 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || ||||| ||||| || | || || || ||| || || | || ||| Sbjct 401 ATCCAAAAGGAATCTACTCTTCACTTGGTGTTGAGACTGAGAGGTGGT 354 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||||||||| || || | || ||||| || | || || || || ||| | | Sbjct 809 ATGCAAATTTTTGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCT 750 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | | || ||||||||||||||||| |||||||| || |||||| Sbjct 749 GACACTATCGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCAA 690 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||| | | || |||||||| || || | || || | || | || ||||| ||| Sbjct 689 CAAAGATTGATTTTTGCCGGTAAGCAACTGGAAGACGGTAGAACGCTGTCTGATTATAAC 630 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||| ||||| || || | ||||| || ||| ||||| | || ||| Sbjct 629 ATTCAGAAAGAGTCTACGTTGCATTTGGTGTTGAGATTGAGAGGTGGT 582 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||||||||| || || | || ||||| || | || || || || ||| | | Sbjct 353 ATGCAAATTTTTGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCT 294 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | | || ||||||||||||||||| |||||||| || || || Sbjct 293 GACACTATTGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATTCCTCCAGACCAG 234 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||| | | || |||||||| || || |||| ||| | || | || || ||||| Sbjct 233 CAAAGATTGATTTTTGCCGGTAAGCAACTAGAAGATGGTAGAACGCTGTCGGACTACAAT 174 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 |||||||| || ||||| | || | || ||| | ||| | || ||| Sbjct 173 ATTCAAAAGGAGTCCACTCTTCACCTTGTCTTGAGGTTGAGGGGTGGT 126 >seq417 Length=1824 Score = 98.7 bits (108), Expect = 8e-16 Identities = 108/144 (75%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || ||||||||||| ||||| ||||| || |||||| | | || ||||| || || Sbjct 1814 AAGATCCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTGATCTTTGCTGGTAAG 1755 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACAT 22422 || || || || | ||| | || || ||||||||||||||||||||||| | || Sbjct 1754 CAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAAAAGAATCCACTTTGCAC 1695 Query 22423 TTAGTTTTGCGATTGCGCGGAGGT 22446 ||||| ||| ||||| | || ||| Sbjct 1694 TTAGTCTTGAGATTGAGAGGTGGT 1671 >seq910 Length=62245 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || ||||||||||| ||||| ||||| || |||||| | | || ||||| || || Sbjct 11 AAGATCCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTGATCTTTGCTGGTAAG 70 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACAT 22422 || || || || | || | || || |||||||| ||||| |||||||| ||||| Sbjct 71 CAATTGGAAGACGGTAGAACTCTATCTGACTACAACATCCAAAAGGAATCCACTTTACAT 130 Query 22423 TTAGTTTTGCGATT 22436 || || ||| |||| Sbjct 131 TTGGTCTTGAGATT 144 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419723273338060